Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 2e-13 seq65 86.0 8e-12 >seq19 Length=3678990 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 192984 GGTCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGG 193042 |||||||| ||||| || |||| || ||||| ||| | || |||| | ||||||| Sbjct 2969756 GGTCAGTT-CGTATTCCACAAATTGGAGATAAGTTTAGCAGTAGACATGGTC-AAAAAGG 2969813 Query 193043 AACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACC 193102 |||| ||| |||| ||| ||||||| || ||||||| |||| | ||| || || Sbjct 2969814 AACTGTTGGAATGACATATACACAAGAGGACATGCCATGGACAATTGAAGGCATCACGCC 2969873 Query 193103 AGATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGC 193162 ||||||||| | || ||| || |||||| ||| | ||||| ||| || | |||| Sbjct 2969874 TGATATTATTGTGAACCCACATGCTATTCCATCCCGTATGACTATTGGGCAGCTGATTGA 2969933 Query 193163 TACTGTTATGGGTAAA 193178 | ||||||||||| Sbjct 2969934 GTGTATTATGGGTAAA 2969949 >seq65 Length=1719075 Score = 86.0 bits (94), Expect = 8e-12 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 192984 GGTCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGG 193042 |||||||| |||||||| |||| || ||||| ||| | || |||| | | ||||| Sbjct 672603 GGTCAGTT-CGTATACCACAAATTGGAGATAAGTTTAGCAGTAGACATGGTC-AGAAAGG 672546 Query 193043 AACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACC 193102 |||| || |||| || ||||||| || ||||||| |||| | ||| || ||| Sbjct 672545 AACTGTCGGAATGACATACACACAAGAGGACATGCCATGGACAATTGAAGGCATCACACC 672486 Query 193103 AGATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGC 193162 ||||||||| | |||||| || |||||| ||| | ||||| || ||| | || | Sbjct 672485 TGATATTATTGTGAATCCACATGCTATTCCATCCCGTATGACTATCGGTCAGCTGATCGA 672426 Query 193163 TACTGTTATGGGTAAA 193178 | ||||||||||| Sbjct 672425 GTGTATTATGGGTAAA 672410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628438601640960