Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15] 11,786 sequences; 334,384,427 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq93 84.2 7e-11 >seq93 Length=1192474 Score = 84.2 bits (92), Expect = 7e-11 Identities = 123/173 (71%), Gaps = 1/173 (1%) Strand=Plus/Minus Query 443698 GCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCT 443757 |||||| |||||| || ||||| || || ||||| || | || ||| ||| | || Sbjct 325375 GCTTCGCCGAGCGGCTCGTCGCGTTCGCCTGCGTCGAGGGCATCTTCTTTT-CGGGATCT 325317 Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 || | ||||||||||| | || || || || || |||| || || || || ||| Sbjct 325316 TTCTGCGCCATCTTCTGGCTCAAGAAACGCGGCCTCATGCCGGGCCTCACTTTCTCCAAC 325257 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTA 443870 || || ||| || ||||||||| |||| |||||||| || || || ||||| Sbjct 325256 GAGCTCATCTCCCGCGACGAGGGTCTGCACTGCGACTTTGCGTGCCTCCTCTA 325204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588096148358770