Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zoysia_20japonica_20[genbank_20GCA_5F001602275.1_202016-03-15]
11,786 sequences; 334,384,427 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4152 172 4e-38
seq5 167 2e-36
seq16 163 2e-35
seq8 161 7e-35
seq37 158 9e-34
seq68 150 1e-31
seq45 141 7e-29
seq22 134 1e-26
seq18 100 2e-16
seq3 100 2e-16
seq39 95.1 9e-15
seq182 93.3 3e-14
seq41 84.2 2e-11
seq2 84.2 2e-11
>seq4152
Length=1438
Score = 172 bits (190), Expect = 4e-38
Identities = 164/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || || |||||| ||||||||||| |||||||| ||| |||| ||
Sbjct 355 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTC 414
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| ||||| ||||||| |||||||| || | || | || ||||| |||
Sbjct 415 CAGCTGCTTACCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 474
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||||| ||| ||||||||
Sbjct 475 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCTT 534
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 535 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 564
>seq5
Length=5768508
Score = 167 bits (184), Expect = 2e-36
Identities = 163/210 (78%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| |||||| |||||| ||||||||||| |||||||| ||| |||| ||
Sbjct 1511093 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 1511034
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||| | |||||||| || | || | || ||||| |||
Sbjct 1511033 GAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 1510974
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||||| ||| || |||||
Sbjct 1510973 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCTT 1510914
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 1510913 CCCCGTCAGGGTCTTCACGAAGATCTGCAT 1510884
>seq16
Length=4050460
Score = 163 bits (180), Expect = 2e-35
Identities = 162/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| |||||| ||||||||||| |||||||| |||| |||| ||
Sbjct 2369239 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGCCCGTCCTC 2369298
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| | |||||||| || | || | || ||||| |||
Sbjct 2369299 GAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 2369358
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||||| ||| || |||||
Sbjct 2369359 GATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATGGTCTT 2369418
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||||||||||||||| |||||
Sbjct 2369419 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 2369448
>seq8
Length=5380884
Score = 161 bits (178), Expect = 7e-35
Identities = 175/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || ||||||| || ||||| || ||| |||||| ||||||||||| ||
Sbjct 978930 CATGCCGCCCCTGAGTCTCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 978989
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||||| ||| | || || |||||||| || || ||||| | |||||||| ||||
Sbjct 978990 AGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGTCGCTGCTGGTCTGG 979049
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||||| | | |||||||| | || ||
Sbjct 979050 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCAGATGACTC 979109
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||||| ||| || |||||||| |||||||||||||||||||||||||||
Sbjct 979110 GACCTCCAGCGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATTTGCATG 979161
Score = 154 bits (170), Expect = 1e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || || || || | || ||||| || ||| |||||| |||||||||||
Sbjct 979155 TTGCATGCCTCCCCTGAGCCTGAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTA 979214
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||||||| ||| | || || |||||||| || || ||||| | ||||||||| ||
Sbjct 979215 GTCGGCGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTC 979274
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283
|| || | || ||||| ||| || || ||||| | | |||||||| | ||
Sbjct 979275 TGGGGGAATGCCCTCCTTGTCCTGGATTTTGGCCTTCACATTGTCGATGGTGTCAGATGA 979334
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||| | ||| || ||||||||||||||||||||||||||||| ||||||
Sbjct 979335 CTCGACCTCAAGCGTGATGGTCTTTCCCGTGAGGGTCTTCACGAAGATCTGCATG 979389
Score = 147 bits (162), Expect = 2e-30
Identities = 171/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || || | || |||||||| ||| |||||| ||||||||||| ||
Sbjct 979386 CATGCCTCCCCTGAGCCTGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 979445
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| |||| || ||||||||||| || ||||| | ||||||||| || |
Sbjct 979446 AGCAAGTGTGCGGCCGTCCTCAAGCTGCTTCCCAGCGAAGATGAGACGCTGCTGGTCCGG 979505
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | ||| ||
Sbjct 979506 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTC 979565
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || |||||||||||||||||||| |||||
Sbjct 979566 AACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 979616
Score = 136 bits (150), Expect = 3e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| |||||| ||||||||||| || || || ||| | || ||
Sbjct 978495 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCCAGGGTGCGACCATCCTC 978554
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| | ||||||||| || | || | || ||||| |||
Sbjct 978555 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCCTG 978614
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| | | |||||||| | || |||||||||| || || |||||
Sbjct 978615 GATCTTCGCCTTCACGTTGTCAATGGTGTCCGAAGACTCCACCTCCAGGGTGATGGTCTT 978674
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||||||||| ||||| |||||
Sbjct 978675 GCCGGTAAGGGTCTTCACAAAGATCTGCAT 978704
Score = 132 bits (146), Expect = 3e-26
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| |||||| ||||||||||| || ||||| || | || ||
Sbjct 978723 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCGAGGGTACGGCCATCCTC 978782
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || |||||||||| ||||||||| || | || | || ||||| |||
Sbjct 978783 CAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 978842
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||| | || || ||||||| || || |||||
Sbjct 978843 GATCTTTGCCTTCACGTTGTCAATCGTGTCAGATGACTCAACCTCCAAAGTGATGGTCTT 978902
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| || || || ||||||
Sbjct 978903 GCCGGTGAGGGTCTTGACAAAAATCTGCATG 978933
>seq37
Length=2664577
Score = 158 bits (174), Expect = 9e-34
Identities = 174/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 1936723 CATGCCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1936664
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| || |||| |||| || |||||||| ||||| ||||| | ||||||||| || |
Sbjct 1936663 GGCAAGGGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGG 1936604
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||| | | | ||||| || | || ||
Sbjct 1936603 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCAGAAGACTC 1936544
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||| || || ||||| || |||||||||||||||||||| ||||||
Sbjct 1936543 CACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATG 1936492
Score = 149 bits (164), Expect = 5e-31
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| ||| |||||| ||||||||||| || || || |||| |||| ||
Sbjct 1937157 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGCCCGTCCTCA 1937098
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || |||||||||| | |||||| || | || | ||||||||| |||
Sbjct 1937097 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTGG 1937038
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| | || |||||||||| || || |||||
Sbjct 1937037 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCCAGGGTGATGGTCTTG 1936978
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| |||||||| ||||||
Sbjct 1936977 CCGGTGAGGGTCTTAACGAAGATCTGCATG 1936948
Score = 147 bits (162), Expect = 2e-30
Identities = 174/234 (74%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 1936951 CATGCCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1936892
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| |||| || |||||||| || || |||||||| | |||||| || |
Sbjct 1936891 AGCAAGGGTACGCCCGTCCTCGAGCTGCTTGCCAGCGAAGATCAACCTCTGCTGGTCCGG 1936832
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | ||| ||||| ||| ||||| ||| || ||| | |||||||| | |||
Sbjct 1936831 GGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT--CAATGGTGTCCGAGGAC 1936774
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||||| || || ||||| || ||||||||||| || ||||| ||||||
Sbjct 1936773 TCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTAACAAAGATCTGCATG 1936720
Score = 141 bits (156), Expect = 7e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | |||||| || || ||| |||||| ||||||||||| ||
Sbjct 1936495 CATGCCTCCCCTGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1936436
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || |||| | || || |||||||| || || ||||| | ||||||||| || |
Sbjct 1936435 AGCAAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGG 1936376
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||| | | | |||||||| | ||| ||
Sbjct 1936375 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAGGACTC 1936316
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || ||||| || |||||||||||||||||||| |||||
Sbjct 1936315 CACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 1936265
Score = 113 bits (124), Expect = 3e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| |||||| || ||||| || || || || ||| | || ||
Sbjct 1937386 CACCAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCTGCAAGAGTGCGGCCATCTTC 1937327
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || || ||||||| | |||||| || | || | || ||||| |||
Sbjct 1937326 CAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTG 1937267
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||||| | || ||||| | || || |||||
Sbjct 1937266 GATCTTGGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCAAGGGTGATGGTCTT 1937207
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||||||| || ||||| |||||
Sbjct 1937206 GCCGGTGAGGGTCTTAACAAAGATCTGCAT 1937177
>seq68
Length=1664768
Score = 150 bits (166), Expect = 1e-31
Identities = 172/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || |||| ||||||||| || || |||||| ||||||||||| ||
Sbjct 547229 CATGCCACCCCTGAGCCTCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTC 547170
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| |||| ||||| ||||| || |||||||| | |||||||||||| |
Sbjct 547169 AGCAAGGGTGCGGCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGATCCGG 547110
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | ||| ||
Sbjct 547109 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGGACTC 547050
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || |||||||||||||||||||| |||||
Sbjct 547049 AACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 546999
Score = 149 bits (164), Expect = 5e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || |||| || ||||| || ||| |||||| ||||||||||| ||
Sbjct 547457 CATGCCACCCCTGAGCCTCAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 547398
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || || | || || |||||||| || |||||||| | ||||||||| || |
Sbjct 547397 AGCAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGGTCCGG 547338
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||||| | | |||||||| | ||| ||
Sbjct 547337 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGGACTC 547278
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||| | ||| || ||||| || |||||||||||||||||||| ||||||
Sbjct 547277 CACCTCAAGCGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 547226
Score = 147 bits (162), Expect = 2e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||| |||||| ||||||||||| || || || ||| | || ||
Sbjct 547664 CACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTC 547605
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || || ||||| | ||||||||| |||| ||| | ||| ||||| |||
Sbjct 547604 AAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTG 547545
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | |||||||| | ||| |||||||| | ||| || |||||
Sbjct 547544 GATCTTAGCCTTCACATTGTCGATGGTGTCCGAGGACTCCACCTCAAGCGTGATGGTCTT 547485
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| ||||||||||| || ||||| ||||||
Sbjct 547484 GCCAGTGAGGGTCTTGACAAAGATCTGCATG 547454
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || ||||| || |||||||| || || || ||| | || ||
Sbjct 547892 CACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGCCAGGGTGCGGCCATCCTC 547833
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || ||||| |||| ||||||||| || | ||| | || ||||| |||
Sbjct 547832 CAGCTGCTTACCAGCAAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 547773
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
|||||| ||||| | | |||||||| | || ||||| || | || || |||||
Sbjct 547772 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAAGACTCCACTTCTAAGGTGATGGTCTT 547713
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || |||||||| ||||| |||||
Sbjct 547712 GCCAGTAAGCGTCTTCACAAAGATCTGCAT 547683
>seq45
Length=2202424
Score = 141 bits (156), Expect = 7e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||||||||| || || |||||| || |||||||||||
Sbjct 1623243 CATGCCACCCCTGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGTATGTTGTAATC 1623184
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| |||| | || || |||||||| ||||||||||| | | |||||| || |
Sbjct 1623183 AGCGAGTGTGCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCCGG 1623124
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 1623123 AGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGACTC 1623064
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || ||||| || ||||||||||| |||||||| |||||
Sbjct 1623063 CACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1623013
Score = 138 bits (152), Expect = 8e-28
Identities = 169/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 1623015 CATACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1622956
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| ||| | || ||||||||||| ||||| ||||| | ||| ||||| || |
Sbjct 1622955 GGCGAGGGTACGCCCATCCTCCAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCCGG 1622896
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | |||||||| | || ||
Sbjct 1622895 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTC 1622836
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| | || || ||||| || ||||||||||| |||||||| |||||
Sbjct 1622835 AACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 1622785
Score = 132 bits (146), Expect = 3e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | | ||| ||||| || ||| |||||| ||||||||||| ||
Sbjct 1622787 CATACCACCCCTGAGACGGAGCACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1622728
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|||||| || |||| ||||||||||| || || ||||| | ||||||||| || |
Sbjct 1622727 GGCGAGGGTACGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGG 1622668
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | || ||||| | |||||
Sbjct 1622667 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATTGTGTCAGATGATTC 1622608
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || ||||| || ||||||||||| || ||||| |||||
Sbjct 1622607 CACCTCAAGGGTGATGGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCAT 1622557
Score = 132 bits (146), Expect = 3e-26
Identities = 156/211 (74%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| || || || ||| |||||| || |||||||| || ||||| ||| | || ||
Sbjct 1623450 CACAAGATGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCGAGAGTGCGGCCATCCTC 1623391
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||||||| |||||||| | ||||||||| || | || | ||||||||| |||
Sbjct 1623390 CAGCTGCTTCCCTGCAAAGATGAGACGCTGCTGGTCCGGGGGGATACCTTCCTTGTCCTG 1623331
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||||| | || ||||||| || || |||||
Sbjct 1623330 GATCTTGGCCTTCACATTGTCAATAGTGTCGGAGCTCTCAACCTCCAGTGTGATGGTCTT 1623271
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || | ||||||||| ||||| ||||||
Sbjct 1623270 GCCAGTCAAGGTCTTCACAAAGATCTGCATG 1623240
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 1622559 CATACCACCCCTCAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTC 1622500
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||||| || | || || |||||||| || |||||||| | | |||||| || |
Sbjct 1622499 AGCGAGGGTACGACCATCCTCGAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCCGG 1622440
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| ||| ||||| ||| | | | || ||||| | || ||
Sbjct 1622439 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATTGTGTCAGAAGACTC 1622380
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||| | || || ||||| || |||||||||||||| ||||| |||||
Sbjct 1622379 CACCTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTCACAAAGATCTGCAT 1622329
>seq22
Length=3457718
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || ||||| ||| ||||| |||||||||||||| || | ||| | || ||
Sbjct 1877636 ACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTACGCCCATCCTCA 1877577
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||||||||| | | ||||||||||| ||| | |||||||| |||
Sbjct 1877576 AGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGG 1877517
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||| | | |||||||| | ||| ||||||||
Sbjct 1877516 ATCTTGGCCTTCACATTATCAATGGTGTCCGAGCTCTCCACCTCTAGCGTGATCGTCTTG 1877457
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || || ||||| || ||||| |||||
Sbjct 1877456 CCAGTCAGAGTCTTGACAAAGATCTGCAT 1877428
Score = 127 bits (140), Expect = 1e-24
Identities = 169/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || || || | || ||| ||||| || || |||||| |||||||||| ||
Sbjct 1877008 CATACCACCCCTAAGGCGCAGCACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTCGTC 1876949
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || || ||||||||||| |||||||| | | |||||| ||||
Sbjct 1876948 CGCCAGTGTGCGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGG 1876889
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
|| | || ||||| ||| ||||| ||| || ||| | || ||||||| | |
Sbjct 1876888 GGGGATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTGT--CAATTGTGTCGGAGCTT 1876831
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||||| ||| || ||||| || || |||||||| || || ||||||||
Sbjct 1876830 TCAACCTCCAACGTGATTGTCTTGCCAGTAAGGGTCTTTACAAAAATTTGCAT 1876778
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| |||||| || ||||| | | || ||||| || || |||||| |||||||||||
Sbjct 1876783 TTGCATTCCACCCCTCAGGCGAAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTA 1876724
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| || | | || | || || |||||||| || ||||| || | | |||||| ||
Sbjct 1876723 ATCAGCCAATGTACGGCCATCTTCTAGCTGCTTACCAGCAAAAATGAGCCTCTGCTGGTC 1876664
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCG 44281
| || | ||| ||||| ||| ||||| ||| || ||| | || ||| | | |
Sbjct 1876663 CGGGGGGATACCCTCCTTATCCTGAATCTTGGCCTTAACATTGT--CGATCGTGCCCGAG 1876606
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | || || ||||| || || || ||||| ||||| || |||||
Sbjct 1876605 CTCTCAACCTCGAGAGTGATGGTCTTGCCAGTCAGTGTCTTGACGAATATCTGCAT 1876550
>seq18
Length=3692672
Score = 100 bits (110), Expect = 2e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| |||||||||||||||| |||||| ||||||||||| ||||| || ||| | ||
Sbjct 917447 CAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCATC 917506
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
|| |||||||| ||||| ||||||| ||||||||||| | |||
Sbjct 917507 CTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGG 917551
>seq3
Length=6757429
Score = 100 bits (110), Expect = 2e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|| || | ||| ||||| || ||| |||||||||||||||||| || || || |||
Sbjct 3310697 AGCCTGAGCACGAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCTGCCAGGGTGCGG 3310638
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
| || ||||||||||||||||||||||||| ||||||||| || | |||
Sbjct 3310637 CCATCCTCCAGCTGCTTCCCGGCAAAGATCAGACGCTGCTGGTCCGGAGG 3310588
>seq39
Length=2543792
Score = 95.1 bits (104), Expect = 9e-15
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||| || || | |||| ||| || || |||||| || |||||||| || ||
Sbjct 1269968 CCACCTCTGAGCCTGAGTACCAAGTGTAGAGTCGACTCCTTCTGAATGTTGTAGTCAGCC 1270027
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || ||||| ||||||||||||||||| | |||
Sbjct 1270028 AGCGTGCGTCCATCCTCCAGCTGCTTGCCAGCAAATATCAAACGCTGCTGATCCGGAGGA 1270087
Query 44231 ACACCTTCCTTTTCC 44245
| |||||||| |||
Sbjct 1270088 ATCCCTTCCTTATCC 1270102
Score = 93.3 bits (102), Expect = 3e-14
Identities = 80/99 (81%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||||||| | ||| |||||| ||||||||||| ||||| || |||||||||
Sbjct 2331123 CAGCACCAGGTGCACCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGCTCGTC 2331182
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||||||| ||||| | |||||||| ||
Sbjct 2331183 CTCCAGCTGCGTCCCGGCGAAGATGAGGCGCTGCTGGTC 2331221
>seq182
Length=231373
Score = 93.3 bits (102), Expect = 3e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||||||| || ||| ||||| ||||||||||| ||||| || ||| |||| ||
Sbjct 101586 CACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTC 101645
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| ||||| ||||||| ||||||||| ||
Sbjct 101646 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 101681
>seq41
Length=2440274
Score = 84.2 bits (92), Expect = 2e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||| ||||| || ||| |||||| ||||||||||| || || || ||| |||| ||
Sbjct 1234862 CACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGGGTGCGGCCGTCCTC 1234921
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||||||||| || || ||||||| ||||||||| ||
Sbjct 1234922 CAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTC 1234957
>seq2
Length=8049247
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|| || | ||| ||||| || ||| |||||| ||||||||||| || || || |||
Sbjct 4369660 AGCCTAAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCTAGGGTGCGG 4369601
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
| || |||| |||||||||||| ||||||| ||||||||| ||
Sbjct 4369600 CCATCCTCCAACTGCTTCCCGGCGAAGATCAGACGCTGCTGGTC 4369557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359938690303962
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |