Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq3116 89.7 4e-13 seq2445 89.7 4e-13 >seq3116 Length=58019 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 19001 TCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATAT 19060 ||||||||| |||| ||||| || |||||||||||| | || || | || | ||||| Sbjct 20374 TCAGTTTTATGTTGAGAACGGGGAGTTATCCTGCCAAATGTATCAACGTTCTGCTGATAT 20315 Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||| ||||| || || ||||||||||| |||| | || || |||||||| | || || Sbjct 20314 GGGTCTTGGAGTTCCATTCAACATTGCATCATATTCTCTGCTAACCTACATGATTGCTCA 20255 Query 19121 TGTT 19124 ||| Sbjct 20254 AGTT 20251 >seq2445 Length=74669 Score = 89.7 bits (98), Expect = 4e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 19001 TCAGTTTTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATAT 19060 ||||||||| |||| ||||| || |||||||||||| | || || | || | ||||| Sbjct 13433 TCAGTTTTATGTTGAGAACGGGGAGTTATCCTGCCAAATGTATCAACGTTCTGCTGATAT 13374 Query 19061 GGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTACCTACATAGTAGCGCA 19120 ||| ||||| || || ||||||||||| |||| | || || |||||||| | || || Sbjct 13373 GGGTCTTGGAGTTCCATTCAACATTGCATCATATTCTCTGCTAACCTACATGATTGCTCA 13314 Query 19121 TGTT 19124 ||| Sbjct 13313 AGTT 13310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399437738391405