Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3116 91.5 1e-13 seq2445 91.5 1e-13 >seq3116 Length=58019 Score = 91.5 bits (100), Expect = 1e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||| | |||| |||||||| |||||||| ||||| ||||| | Sbjct 20252 ACTTGAGCAATCATGTAGGTTAGCAGAGAATATGATGCAATGTTGAATGGAACTCCAAGA 20311 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874 ||||||||||| || | |||||||| ||| ||||| | || || || || |||||||| Sbjct 20312 CCCATATCAGCAGAACGTTGATACATTTGGCAGGATAACTCCCCGTTCTCA-ACATAAAA 20370 Query 101875 TTGA 101878 ||| Sbjct 20371 CTGA 20374 >seq2445 Length=74669 Score = 91.5 bits (100), Expect = 1e-13 Identities = 96/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 101756 ACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAAC 101815 || |||||||||||| | |||| |||||||| |||||||| ||||| ||||| | Sbjct 13311 ACTTGAGCAATCATGTAGGTTAGCAGAGAATATGATGCAATGTTGAATGGAACTCCAAGA 13370 Query 101816 CCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCC-ATCACAGACATAAAA 101874 ||||||||||| || | |||||||| ||| ||||| | || || || || |||||||| Sbjct 13371 CCCATATCAGCAGAACGTTGATACATTTGGCAGGATAACTCCCCGTTCTCA-ACATAAAA 13429 Query 101875 TTGA 101878 ||| Sbjct 13430 CTGA 13433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361191282988859