Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1245 93.3 6e-14 seq846 93.3 6e-14 >seq1245 Length=124263 Score = 93.3 bits (102), Expect = 6e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||| || || || || || || || || || |||||||| |||||||| || || |||| Sbjct 66983 TTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAAT 66924 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || ||| | ||||||||| |||||||| ||||||||||| || || | || |||| Sbjct 66923 TGGAAGATGGAAGAACATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGG 66864 Query 124747 T 124747 | Sbjct 66863 T 66863 >seq846 Length=151982 Score = 93.3 bits (102), Expect = 6e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 124627 TTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAAT 124686 |||| || || || || || || || || || |||||||| |||||||| || || |||| Sbjct 29496 TTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAAT 29437 Query 124687 TAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGG 124746 | || ||| | ||||||||| |||||||| ||||||||||| || || | || |||| Sbjct 29436 TGGAAGATGGAAGAACATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGG 29377 Query 124747 T 124747 | Sbjct 29376 T 29376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755327487491200