Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq3116 91.5 1e-13 seq2445 91.5 1e-13 >seq3116 Length=58019 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| |||| || || || || || |||||||||||||| || ||||||||| Sbjct 20373 CAGTTTTATGTTGAGAACGGGGAGTTATCCTGCCAAATGTATCAACGTTCTGCTGATATG 20314 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || || ||||| ||||| |||||| ||| | ||||| || || |||||||| || Sbjct 20313 GGTCTTGGAGTTCCATTCAACATTGCATCATATTCTCTGCTAACCTACATGATTGCTCAA 20254 Query 20551 GTT 20553 ||| Sbjct 20253 GTT 20251 >seq2445 Length=74669 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || ||||| |||| || || || || || |||||||||||||| || ||||||||| Sbjct 13432 CAGTTTTATGTTGAGAACGGGGAGTTATCCTGCCAAATGTATCAACGTTCTGCTGATATG 13373 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || || || ||||| ||||| |||||| ||| | ||||| || || |||||||| || Sbjct 13372 GGTCTTGGAGTTCCATTCAACATTGCATCATATTCTCTGCTAACCTACATGATTGCTCAA 13313 Query 20551 GTT 20553 ||| Sbjct 13312 GTT 13310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399117791466505