Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1245 82.4 7e-11 seq846 82.4 7e-11 >seq1245 Length=124263 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| || || || || || || || ||||| || |||| | || || ||| | ||| Sbjct 66978 GACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAATTGGAA 66919 Query 26922 GATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| |||| | | ||| || ||||||||||||||||| || || | || ||||||| Sbjct 66918 GATGGAAGAA-CATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGGTCCT 66860 Query 26981 GAGACTTAGAGGAGGAA 26997 ||| || ||||| |||| Sbjct 66859 GAGGCTCAGAGGTGGAA 66843 >seq846 Length=151982 Score = 82.4 bits (90), Expect = 7e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 ||||| || || || || || || || ||||| || |||| | || || ||| | ||| Sbjct 29491 GACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAATTGGAA 29432 Query 26922 GATGATAGAAACGTCAGC-GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 |||| |||| | | ||| || ||||||||||||||||| || || | || ||||||| Sbjct 29431 GATGGAAGAA-CATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGGTCCT 29373 Query 26981 GAGACTTAGAGGAGGAA 26997 ||| || ||||| |||| Sbjct 29372 GAGGCTCAGAGGTGGAA 29356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478580973542480