Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1263 322 9e-83 seq3117 318 1e-81 seq1353 311 2e-79 >seq1263 Length=124836 Score = 322 bits (356), Expect = 9e-83 Identities = 517/729 (71%), Gaps = 18/729 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || |||||||||||||| ||||||||||| ||||||||||| | |||||||| Sbjct 19866 CTAGCTTTCTTCGCCGCCTCCGACGGCATAGTGCTCGAGAACCTGGCGTCGCGGTTCATG 19925 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || ||| ||||||||| ||| |||||||||||||| ||||| |||||| Sbjct 19926 TCCGACGTCCAGGTGGCCGAGGCGCGCGCCTTTTACGGCTTCCAGATCGCCATCGAGAAC 19985 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||||| | ||||| | || ||||||| || || |||| Sbjct 19986 ATCCACTCGGAGATGTACTCGCTGCTGCTGGAGACCTACATCCGCGACGGCGCCGAGAAG 20045 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || | |||||| ||||| ||||| | ||| | | ||||| || ||||| Sbjct 20046 GACCGCCTGTTCCGCGCCATAGAGACCGTCCCCGCCGTGCGCCGCAAGGCCGAGTGGGCC 20105 Query 42663 CTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 | |||||||||| | ||| ||| |||| |||| |||| || || || || Sbjct 20106 ATGCGCTGGATCGAGGGCGGCGAGCGC----TTCGCCGAGCGGCTCGTCGCGTTCGCCTG 20161 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 |||||||||||||||||| ||||| | ||| | ||||||||||||||||| | | | Sbjct 20162 CGTCGAGGGCATCTTCTTTTCGGGATCTTTCTGCGCCATCTTCTGGCTCAAG-AAACGCG 20220 Query 42782 GTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | | ||||| || ||||| ||||| ||||| |||||| | | |||||||| ||||| Sbjct 20221 GCCTCATGCCGGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTGCACT 20280 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA--AGGAGCG 42898 | ||||||||||||||||| | ||| || ||| | |||| ||||| || ||| Sbjct 20281 GCGACTTTGCCTGCCTCCTCT--ACGA-CCTTCTCCGCGTCAAG--CTCGACGAGTCGCG 20335 Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT 42958 ||||| | || || | || ||||| || || ||| |||||| || | |||| Sbjct 20336 CGTCCGCGAGATAGTCGCCGACGCCGTCGATATAGAGCGCGAGTTCGTCTGCGACGCGCT 20395 Query 42959 GCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGC 43018 ||| | || |||||||||||| || |||||| | |||||||| ||| |||||| Sbjct 20396 CCCCTGCGCGCTAGTCGGCATGAACGGCGTGCTCATGAGTCAGTACATCGAGTTCGTCGC 20455 Query 43019 CGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAAC-ACGCCGTGCCCCTTC 43076 ||||| || || || | | |||| | || | |||||| |||| ||| ||| Sbjct 20456 CGACCGCCTGCTCATGGC-GCTGGGCCACAAGAAGATGTACAACGTCGCC-AACCCGTTC 20513 Query 43077 GACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCC 43136 |||| |||||| ||||| | |||||||||||||||| |||||||||||||||| | Sbjct 20514 GACTGGATGGAGCTTATCTCCCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGC 20573 Query 43137 GACTACCAG 43145 || |||||| Sbjct 20574 GAGTACCAG 20582 >seq3117 Length=57653 Score = 318 bits (352), Expect = 1e-81 Identities = 514/728 (71%), Gaps = 16/728 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || |||||||||||||| ||||||||||| ||||||||||| | |||||||| Sbjct 28555 CTCGCTTTCTTCGCCGCCTCCGACGGCATAGTGCTCGAGAACCTGGCGTCGCGGTTCATG 28614 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || ||| ||||||||| ||| |||||||||||||| ||||| |||||| Sbjct 28615 TCCGACGTCCAGGTGGCCGAGGCGCGCGCCTTTTACGGCTTCCAGATCGCCATCGAGAAC 28674 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||| ||| ||||| | ||||| | || ||||||| || || |||| Sbjct 28675 ATCCACTCGGAGATGTACTCGCTGCTGCTGGAGACCTACATCCGCGACGGCGCCGAGAAG 28734 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || | |||||| ||||| ||||| | ||| | | ||||| || ||||| Sbjct 28735 GACCGCCTGTTCCGCGCCATAGAGACCGTCCCCGCCGTGCGCCGCAAGGCCGAGTGGGCC 28794 Query 42663 CTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 | |||||||||| | ||| ||| |||| |||| |||| || || || || Sbjct 28795 ATGCGCTGGATCGAGGGCGGCGAGCGC----TTCGCCGAGCGGCTCGTCGCGTTCGCCTG 28850 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGT 42781 |||||||||||||||||| ||||| | ||| | ||||||||||||||||| | | | Sbjct 28851 CGTCGAGGGCATCTTCTTTTCGGGATCTTTCTGCGCCATCTTCTGGCTCAAG-AAACGCG 28909 Query 42782 GTC-GATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | | ||||| || ||||| ||||| ||||| |||||| | | |||||||| ||||| Sbjct 28910 GCCTCATGCCGGGCCTCACTTTCTCCAACGAGCTCATCTCCCGCGACGAGGGTCTGCACT 28969 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA--AGGAGCG 42898 | |||||||| |||||||| | ||| | ||| | |||| ||||| || ||| Sbjct 28970 GCGACTTTGCGTGCCTCCTCT--ACGA-TCTTCTCCGCGTCAAG--CTCGACGAGTCGCG 29024 Query 42899 GGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCT 42958 ||||| | || || | || ||||| || || ||| |||||| || | |||| Sbjct 29025 CGTCCGCGAGATAGTCGCCGACGCCGTCGATATAGAGCGCGAGTTCGTCTGCGACGCGCT 29084 Query 42959 GCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGC 43018 ||| | || |||||||||||| || |||||| | |||||||| ||| |||||| Sbjct 29085 CCCCTGCGCGCTAGTCGGCATGAACGGCGTGCTCATGAGTCAGTACATCGAGTTCGTCGC 29144 Query 43019 CGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCG 43077 ||||| || || || | | |||||| || | |||||| | | ||| |||| Sbjct 29145 CGACCGCCTGCTCATGGC-GCTGGGTCACAAGAAGATGTACAACGTGGCCAACCCGTTCG 29203 Query 43078 ACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCG 43137 ||| |||||| ||||| | |||||||||||||||| |||||||||||||||| || Sbjct 29204 ACTGGATGGAGCTTATCTCCCTCCAGGGCAAGACCAACTTCTTCGAGAAGCGCGTCGGCG 29263 Query 43138 ACTACCAG 43145 | |||||| Sbjct 29264 AGTACCAG 29271 >seq1353 Length=118606 Score = 311 bits (344), Expect = 2e-79 Identities = 628/916 (69%), Gaps = 23/916 (3%) Strand=Plus/Plus Query 42240 GAGCCGCTCCTGGCGCCGAGCAACTCCAGGTTCACCCTGGACGTGATCGAGCACCAGGAC 42299 ||||||||||||||| | | | | | ||| || || | |||| || ||| | | Sbjct 94791 GAGCCGCTCCTGGCGGAGTCCTCCGACCGCTTCTCCATGTTCCCGATCAAGTACCCGCAG 94850 Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| | ||||||||||| | || |||||||||||||||| | ||||| Sbjct 94851 ATCTGGGAGTTCTACAAGAAGGCCGTGGCTTCGTTCTGGACCGCCGAGGAGGTGGACCTC 94910 Query 42360 GCCAAGGACACGGCCGGC--TGGGA-GTCACTGTCT--GAGAACGAAAAGTTTTTCCTCA 42414 || ||| | |||| ||||| | | | || | | |||| ||| || Sbjct 94911 TCCGCCGACGTG--CGGCACTGGGACGCCGCGCTCAACGCGGACGAGCGCCACTTCATCT 94968 Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474 || | || |||||||||||||| || |||||||| || ||||||||||| | Sbjct 94969 CCCACGTTCTCGCCTTCTTCGCCGCGTCCGACGGCATCGTGCTCGAGAACCTGGCGTCGC 95028 Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534 |||||||| || || ||| | ||||||||| ||||||||||||||||| |||| Sbjct 95029 GGTTCATGTCCGACGTCCAGGTCGCCGAGGCGCGCGCGTTCTACGGCTTCCAGATCGCCA 95088 Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCG 42594 | |||||| | ||||| ||| ||||| | ||||| | || ||||||| || || Sbjct 95089 TTGAGAACATCCACTCGGAGATGTACTCGCTGCTGCTGGAGACCTACATCCGCGACGGCG 95148 Query 42595 TCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 ||| || |||| ||| ||||| |||||| | ||| | | ||||| | Sbjct 95149 CGGAGAAGGACCGGCTCTTCCGAGCCATAGAGACGGTCCCCGCCGTGCGCCGCAAGGCCG 95208 Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCC 42713 | ||| | | |||||||||| | ||| ||| |||| |||| | || || || Sbjct 95209 AGTGGACCATGCGCTGGATCGAGGGCGGCGAGCGC----TTCGCCGAGCGTCTTGTCGCG 95264 Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAG 42773 || || ||||||||||||||||||||||||| | ||| | ||||||||||||||||| Sbjct 95265 TTCGCCTGCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCTGCGCCATCTTCTGGCTCAAG 95324 Query 42774 CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGG 42833 | | | ||||| || ||||||||||| ||||| |||||| | | |||||||| Sbjct 95325 AAACGCGGGCTCATGCCAGGCCTCACCTTCTCCAACGAGCTCATCTCCCGCGACGAGGGC 95384 Query 42834 CTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGA-- 42891 ||||| | ||||| || ||||| || | ||| || |||| | |||| || || Sbjct 95385 CTGCACTGCGACTTCGCGTGCCTTCTCT--ACGA-CCTCCTCCGCGTCAAG--CTGGACG 95439 Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGC 42951 || || ||||| | ||| || | || ||||| || |||||| |||||| || Sbjct 95440 AGTCCCGCGTCCGCGAGATCGTCGCCGACGCCGTCGACATCGAGCGCGAGTTCGTCTGCG 95499 Query 42952 AGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGT 43011 | |||| ||| | || |||||||||||| || || ||| || ||||| || ||| Sbjct 95500 ACGCGCTTCCCTGCGCACTCGTCGGCATGAACGGCGTGCTTATGAGCCAGTACGTCGAGT 95559 Query 43012 ACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAAC-ACGCCGTG 43069 ||||||||||| || || || | |||| | || | |||||| |||| Sbjct 95560 TCGTCGCCGACCGCCTGCTAATGGC-TTTGGGGCACAAGAAGATGTACAACGTCGCC-AA 95617 Query 43070 CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCG 43129 || ||||||| |||||| |||||| || |||| ||||||||||| ||||||||||| Sbjct 95618 TCCGTTCGACTGGATGGAGCTCATCTCCCTGCAGGGTAAGACCAACTTCTTCGAGAAGCG 95677 Query 43130 CGTCGCCGACTACCAG 43145 ||||| ||| |||||| Sbjct 95678 CGTCGGCGAGTACCAG 95693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944178556097840