Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq990 95.1 1e-14 seq212 95.1 1e-14 seq7458 91.5 1e-13 seq987 91.5 1e-13 seq8367 89.7 4e-13 seq8345 87.8 1e-12 seq5666 86.0 5e-12 seq2169 86.0 5e-12 seq1015 86.0 5e-12 seq8279 84.2 2e-11 seq2944 84.2 2e-11 seq1222 84.2 2e-11 seq559 84.2 2e-11 seq463 84.2 2e-11 seq4683 82.4 6e-11 seq1677 82.4 6e-11 seq960 82.4 6e-11 seq721 82.4 6e-11 >seq990 Length=138715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || |||| ||||||||| || || || ||||||||| |||||||| || || Sbjct 23772 CCACCCCTGAGCCTCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGC- 23830 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || |||| |||| ||||||||| ||||| || || |||||||||||| || Sbjct 23831 AAGGGTGCGGCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGATCCGGGGG 23890 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 23891 GATGCCCTCCTTGTCC 23906 >seq212 Length=258318 Score = 95.1 bits (104), Expect = 1e-14 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || |||| ||||||||| || || || ||||||||| |||||||| || || Sbjct 17360 CCACCCCTGAGCCTCAGCACCAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCAGC- 17418 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || |||| |||| ||||||||| ||||| || || |||||||||||| || Sbjct 17419 AAGGGTGCGGCCGTCCTCCAGTTGCTTGCCAGCAAAGATGAGACGCTGCTGATCCGGGGG 17478 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 17479 GATGCCCTCCTTGTCC 17494 >seq7458 Length=12204 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||||||||| ||||||||| ||||||||| |||||||| || |||| || Sbjct 5781 AGGCGCAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGG 5722 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | || || | ||||||||||| || |||||||||||||| ||| Sbjct 5721 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 5677 >seq987 Length=139275 Score = 91.5 bits (100), Expect = 1e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||||||||| ||||||||| ||||||||| |||||||| || |||| || Sbjct 130109 AGGCGCAGCACCAGGTGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 130168 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | || || | ||||||||||| || |||||||||||||| ||| Sbjct 130169 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCC 130213 >seq8367 Length=7795 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| || || || |||||||| || || ||| ||||||||| |||||||| || || Sbjct 94 CCTCCCCTGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC- 152 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || ||| |||| || | ||||||||||| || || || |||||||| ||| || Sbjct 153 AAGGGTGCGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCCGGAGG 212 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 213 GATGCCCTCCTTGTCC 228 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| || || || ||||||||||| || ||| ||||||||| |||||||| || | | Sbjct 322 CCTCCCCTGAGGCGGAGCACCAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG-C 380 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || ||| | || || | |||||||| || || || || |||||||| ||| || Sbjct 381 AAGGGTGCGCCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCCGGAGG 440 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 441 GATGCCCTCCTTGTCC 456 >seq8345 Length=7904 Score = 87.8 bits (96), Expect = 1e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || || || || |||||||| || || ||| ||||||||| |||||||| || || Sbjct 7716 ACCACCCCTGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 7775 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || || ||| | || |||| |||||||||||||| || || || ||||| ||| | Sbjct 7776 -AAGGGTACGCCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCCGGTG 7834 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 7835 GGATGCCCTCCTTGTCC 7851 Score = 86.0 bits (94), Expect = 5e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || || |||||||| || || || ||||||||| ||||||||||| | | Sbjct 7489 CCACCCCTGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGTATGTTGTAATCAG-C 7547 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || ||| ||| | || || | |||||||||||||| || || | |||||| ||| || Sbjct 7548 AAGTGTGCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGG 7607 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 7608 GATGCCCTCCTTGTCC 7623 >seq5666 Length=23988 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || |||| ||| |||| |||||||| ||| ||||||||||||||||| || Sbjct 18560 CCACCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGCT 18619 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || | | || ||||||||||| || ||||| ||||| | ||||| || || Sbjct 18620 AACGTTCTCCCATCTTCCAATTGCTTACCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGA 18679 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 18680 ATGCCCTCCTTGTCC 18694 >seq2169 Length=81208 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || |||| ||| |||| |||||||| ||| ||||||||||||||||| || Sbjct 76081 CCACCCCTGAGCCTCAGGACCAAGTGAAGCGTCGACTCTTTCTGAATGTTGTAATCAGCT 76140 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 || || | | || ||||||||||| || ||||| ||||| | ||||| || || Sbjct 76141 AACGTTCTCCCATCTTCCAATTGCTTACCAGCAAAGATCAGCCTTTGCTGGTCTGGGGGA 76200 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 76201 ATGCCCTCCTTGTCC 76215 >seq1015 Length=139126 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| | || || |||||||| || |||||| ||||||||| |||||||| || || Sbjct 101320 CCTCCGCGGAGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCG 101379 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || |||| || | ||||| ||||| || || ||||||||||| ||| ||| Sbjct 101380 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGG 101439 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 101440 ATGCCCTCCTTGTCC 101454 >seq8279 Length=8219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972 ||||| || |||||||| ||| |||||||| ||||||||||||||||| ||| | Sbjct 7175 CGCAGGACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTACGCCCA 7116 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || | ||||| |||||||| || || | ||||||||| Sbjct 7115 TCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATC 7075 >seq2944 Length=63207 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| || || ||| ||||||||| |||||||| || || | ||| Sbjct 48225 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGC 48166 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || | |||||||| || || || ||||||||||| ||| ||| | || ||| Sbjct 48165 CCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 48106 Query 34030 TTGTCC 34035 |||||| Sbjct 48105 TTGTCC 48100 >seq1222 Length=126723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| || |||||| ||||||||| |||||||| || || | || Sbjct 6999 AGGCGGAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGG 6940 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| || | ||||| ||||| || || ||||||||||| ||| ||| | || ||| Sbjct 6939 CCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGCGGGATGCCCTCC 6880 Query 34030 TTGTCC 34035 |||||| Sbjct 6879 TTGTCC 6874 >seq559 Length=180664 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| || || || ||||||||| |||||||| || || | || Sbjct 32343 AGGCGGAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGG 32284 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| |||| ||||||||||| || ||||| |||||||| ||| ||| | || ||| Sbjct 32283 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCCTCC 32224 Query 34030 TTGTCC 34035 |||||| Sbjct 32223 TTGTCC 32218 >seq463 Length=196461 Score = 84.2 bits (92), Expect = 2e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 33913 CGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCG 33972 ||||| || |||||||| ||| |||||||| ||||||||||||||||| ||| | Sbjct 43440 CGCAGGACAAGATGAAGAGTGGATTCCTTCTGGATGTTGTAATCTGCCAAGGTACGCCCA 43381 Query 33973 TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || || | ||||| |||||||| || || | ||||||||| Sbjct 43380 TCCTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATC 43340 >seq4683 Length=34250 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||||||||| || | ||| ||||||||| |||||||| || |||| ||| Sbjct 4901 AGGCGCAGCACCAGGTGCACCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGC 4960 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 ||||| |||| ||| | ||||| || || ||||||||||| ||| Sbjct 4961 TCGTCCTCCAGCTGCGTCCCGGCGAAGATGAGGCGCTGCTGGTCC 5005 >seq1677 Length=100863 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| || || ||| ||||||||| |||||||| || |||| || Sbjct 51711 AGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 51770 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 |||| |||| ||||||||||| || ||||| |||||||| ||| Sbjct 51771 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCC 51815 >seq960 Length=142277 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || || |||||||| || || ||| ||||||||| |||||||| || |||| || Sbjct 30725 AGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGG 30666 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 |||| |||| ||||||||||| || ||||| |||||||| ||| Sbjct 30665 CCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCC 30621 >seq721 Length=162589 Score = 82.4 bits (90), Expect = 6e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||||||||| || | ||| ||||||||| |||||||| || |||| ||| Sbjct 153292 AGGCGCAGCACCAGGTGCACCGTCGACTCCTTCTGGATGTTGTAGTCGGCCAGGGTGCGC 153233 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCC 34014 | ||| |||| ||||| ||||| || || ||||||||||| ||| Sbjct 153232 TTGTCCTCCAGCTGCTTCCCGGCGAAGATGAGGCGCTGCTGGTCC 153188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396996543354418