Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq463 86.0 4e-12 >seq463 Length=196461 Score = 86.0 bits (94), Expect = 4e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 39529 TCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAA 39588 || || || ||||| ||||| ||||| ||| |||| || | ||| ||||| |||| Sbjct 43188 TCCTTCTGGATATTGTAATCAGCCAATGTGCGCCCATCCTCGAGTTGCTTCCCAGCAAAG 43129 Query 39589 ATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTC 39648 || | |||||||| || | || | |||||| ||||| || ||| || | | Sbjct 43128 ATGAGTCGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCCTGGATCTTTGCCTTCACATTA 43069 Query 39649 GCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACG 39708 | | |||||||| ||| || || || | |||||| || || || || | ||| || || Sbjct 43068 TCGATTGTGTCTGAGCTCTCAACCTCAAGAGTAATAGTCTTTCCAGTGAGAGTCTTCACA 43009 Query 39709 AAGATCTGCATG 39720 |||||||||||| Sbjct 43008 AAGATCTGCATG 42997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347311985386697