Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2076 136 2e-26 seq1770 129 2e-24 seq6491 125 3e-23 seq317 123 1e-22 seq259 95.1 5e-14 seq463 91.5 6e-13 seq1245 87.8 7e-12 seq846 87.8 7e-12 seq797 87.8 7e-12 seq253 87.8 7e-12 seq217 86.0 2e-11 seq2497 84.2 9e-11 seq1412 84.2 9e-11 seq783 84.2 9e-11 >seq2076 Length=85219 Score = 136 bits (150), Expect = 2e-26 Identities = 207/294 (70%), Gaps = 12/294 (4%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| || || ||||| || ||||| ||| || |||| | ||| | | || Sbjct 69302 GTTCTGACCAAGATGAAGGAGACAGCTGAATCTTACCTTGGCAAATCTGTTTCAAAGGCT 69361 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||||||||| |||||||||||||||||||| || ||||| || || |||||||| Sbjct 69362 GTGATTACTGTTCCAGCTTATTTCAATGATGCACAGCGTCAAGCCACAAAGGATGCAGGT 69421 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | |||||||| | ||||| |||| || |||||||| |||||||||||||| | Sbjct 69422 CGGATTGCTGGCCTCGATGTTGAAAGAATCATCAATGAACCAACAGCAGCTGCTCTGTCT 69481 Query 451445 TATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGT 451504 |||||| | ||| | || || || | |||| ||| |||||| |||| Sbjct 69482 TATGGA--ATGAACAACA--------AGGAGGGATTAATA--GCAGTTTTTGATCTTGGA 69529 Query 451505 GGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 ||||||||| ||||| ||| | || || | ||||||| ||||| ||| Sbjct 69530 GGAGGAACTTTTGATATCTCTATTCTGGAGATCTCAAATGGGGTTTTTGAGGTA 69583 >seq1770 Length=95507 Score = 129 bits (142), Expect = 2e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| || || ||||| ||||| || ||| || ||||| | ||| | | || Sbjct 83193 GTTCTGACGAAGATGAAGGAAACTGCTGAATCTTACCTTGGTAAATCTGTTTCGAAGGCT 83134 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||||||||| ||||||||||||||||| || || || || || ||||||||||| Sbjct 83133 GTGATTACTGTTCCAGCTTATTTCAATGATGCGCAGCGTCAGGCCACAAAAGATGCAGGC 83074 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | ||||||||| | |||| | |||||||||||||| || ||||||||||| | Sbjct 83073 CGCATTGCTGGTCTCGATGTGGAAAGGATTATTAATGAACCAACGGCAGCTGCTCTGTCT 83014 Query 451445 TATGGA 451450 |||||| Sbjct 83013 TATGGA 83008 >seq6491 Length=17682 Score = 125 bits (138), Expect = 3e-23 Identities = 167/231 (72%), Gaps = 12/231 (5%) Strand=Plus/Minus Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 ||||||||||| |||||||||||||||||||| || ||||| || || |||||||| | Sbjct 17680 ATTACTGTTCCAGCTTATTTCAATGATGCACAGCGTCAAGCCACAAAGGATGCAGGTCGG 17621 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 |||||||| | ||||| |||| || |||||||| |||||||||||||| | ||| Sbjct 17620 ATTGCTGGCCTCGATGTTGAAAGAATCATCAATGAACCAACAGCAGCTGCTCTGTCTTAT 17561 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 ||| | ||| | || || || | |||| ||| |||||| |||| ||| Sbjct 17560 GGA--ATGAACAACA--------AGGAGGGATTAATA--GCAGTTTTTGATCTTGGAGGA 17513 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTA 451558 |||||| ||||| ||| | || ||| | |||| || ||||| ||| Sbjct 17512 GGAACTTTTGATATCTCTATTCTGGAGATTTCAAATGGAGTTTTTGAGGTA 17462 >seq317 Length=225498 Score = 123 bits (136), Expect = 1e-22 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||||| || || ||||| ||||| || ||| || ||||| | ||| | | || Sbjct 213855 GTTCTGACGAAGATGAAGGAAACTGCTGAATCTTACCTTGGTAAATCTGTTTCGAAGGCT 213796 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||||||||| || |||||||||||||| || || || || || ||||||||||| Sbjct 213795 GTGATTACTGTTCCAGCATATTTCAATGATGCGCAGCGTCAGGCCACAAAAGATGCAGGC 213736 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 | ||||||||| | |||| | |||||||||||||| || ||||||||||| | Sbjct 213735 CGCATTGCTGGTCTCGATGTGGAAAGGATTATTAATGAACCAACGGCAGCTGCTCTGTCT 213676 Query 451445 TATGGA 451450 |||||| Sbjct 213675 TATGGA 213670 >seq259 Length=246582 Score = 95.1 bits (104), Expect = 5e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 451271 ACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATT 451330 || || ||||| || ||||||||| ||| |||| | || | | ||||| || Sbjct 38216 ACCAAGATGAAGGAGACAGCAGAAGCTTATCTTGGCAAATCTGTCTCAAAGGCAGTGGTT 38157 Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 |||||||| || |||||||| ||||| || || ||||| || || |||||||| | ||| Sbjct 38156 ACTGTTCCAGCATATTTCAACGATGCTCAGCGTCAAGCCACAAAGGATGCAGGCCGCATT 38097 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| | | ||| | || || ||||| || |||||||||||| | | |||||| Sbjct 38096 GCTGGCCTTGAGGTTGAAAGGATCATCAATGAGCCAACAGCAGCTGCTTTGTCTTATGGA 38037 >seq463 Length=196461 Score = 91.5 bits (100), Expect = 6e-13 Identities = 155/225 (69%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || ||||| || |||||||||||||| ||||| || Sbjct 42998 ATGCAGATCTTTGTGAAGACTCTCACTGGAAAGACTATTACTCTTGAGGTTGAGAGCTCA 43057 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||| || || || |||||||| || || || || || Sbjct 43058 GACACAATCGATAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATCCCACCAGACCAG 43117 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | ||||| ||||| || ||||| | || ||||| ||||| ||| Sbjct 43118 CAGCGACTCATCTTTGCTGGGAAGCAACTCGAGGATGGGCGCACATTGGCTGATTACAAT 43177 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || |||||| | || | | || |||||| Sbjct 43178 ATCCAGAAGGAGTCTACTCTTCACCTTGTCCTGCGCCTCAGAGGA 43222 >seq1245 Length=124263 Score = 87.8 bits (96), Expect = 7e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 391138 TTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAAC 391197 |||| || ||||| || ||||| || || || ||| | | ||||| | || || ||| Sbjct 66983 TTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAAT 66924 Query 391198 TTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAG 391257 | |||||||||||||| || || |||||||| ||| | || || | ||||||||||| | Sbjct 66923 TGGAAGATGGAAGAACATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGG 66864 Query 391258 TATTAAGACTGAGAGG 391273 | | || || ||||| Sbjct 66863 TCCTGAGGCTCAGAGG 66848 >seq846 Length=151982 Score = 87.8 bits (96), Expect = 7e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 391138 TTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAAC 391197 |||| || ||||| || ||||| || || || ||| | | ||||| | || || ||| Sbjct 29496 TTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAAT 29437 Query 391198 TTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAG 391257 | |||||||||||||| || || |||||||| ||| | || || | ||||||||||| | Sbjct 29436 TGGAAGATGGAAGAACATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGG 29377 Query 391258 TATTAAGACTGAGAGG 391273 | | || || ||||| Sbjct 29376 TCCTGAGGCTCAGAGG 29361 >seq797 Length=160493 Score = 87.8 bits (96), Expect = 7e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 |||| | ||||| |||| ||||| || |||||||||||| ||||| | |||||| | Sbjct 15301 TTACAAAAGCAGTTGTTACAGTTCCAGCATATTTCAATGATTCACAAAGAACAGCAACAA 15360 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 ||||||| || | |||||| || | | |||||||| ||||| || ||||| || || | Sbjct 15361 AAGATGCTGGCCGTATTGCAGGACTGGAGGTTCTTCGTATTATAAACGAACCAACTGCTG 15420 Query 451434 C 451434 | Sbjct 15421 C 15421 >seq253 Length=256332 Score = 87.8 bits (96), Expect = 7e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 451314 TTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTA 451373 |||| | ||||| |||| ||||| || |||||||||||| ||||| | |||||| | Sbjct 139108 TTACAAAAGCAGTTGTTACAGTTCCAGCATATTTCAATGATTCACAAAGAACAGCAACAA 139049 Query 451374 AAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAG 451433 ||||||| || | |||||| || | | |||||||| ||||| || ||||| || || | Sbjct 139048 AAGATGCTGGCCGTATTGCAGGACTGGAGGTTCTTCGTATTATAAACGAACCAACTGCTG 138989 Query 451434 C 451434 | Sbjct 138988 C 138988 >seq217 Length=261035 Score = 86.0 bits (94), Expect = 2e-11 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 |||||| |||| ||||| || ||||||||||| | || ||| || | || ||| Sbjct 170507 TTTGCTGCTGAGGAAATCTCCTCTATGGTTCTCATCAAGATGCGTGAGATTGCTGAAGCT 170566 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 || |||| | || | |||| || | || ||||| || || |||||||| | Sbjct 170567 TACCTTGGCAGCACTGTCAAGAATGCTGTTGTCACAGTTCCTGCCTACTTCAATGACTCT 170626 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || |||| || || || ||||| || ||||||||| | ||||| || || || || Sbjct 170627 CAGAGGCAGGCCACCAAGGATGCGGGTGTGATTGCTGGTCTGAATGTCCTCCGTATCATC 170686 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 ||||| || || || |||||| | || ||||| || Sbjct 170687 AATGAGCCCACTGCTGCTGCTATTGCCTATGGTCT 170721 >seq2497 Length=71517 Score = 84.2 bits (92), Expect = 9e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 391143 GATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAA 391202 ||||||||||| |||||||| |||||||| | ||| || || | || || || ||||| Sbjct 23091 GATAAGGAAGGGATTCCTCCAGATCAACAGCATTTGATATTTGCTGGCAAGCAGCTTGAG 23150 Query 391203 GATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 |||||| | || |||| || || || ||| | ||||| |||| || ||||| || Sbjct 23151 GATGGACGCACGCTGGCTGACTACAACATTCAGAAGGAGTCAACTCTCCACTTGGT 23206 >seq1412 Length=113785 Score = 84.2 bits (92), Expect = 9e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 391140 CAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTT 391199 || ||||||||||| |||||||| ||||| || ||||| || || | || || || || Sbjct 75106 CAGGATAAGGAAGGGATTCCTCCGGATCAGCAGCGTTTGATATTTGCTGGCAAGCAGCTG 75047 Query 391200 GAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 || |||||| | || |||| || || || ||| | ||||| | || || ||||| ||| Sbjct 75046 GAGGATGGACGCACGCTGGCTGACTACAACATTCAGAAGGAGTCGACTCTACACTTGGTA 74987 Query 391260 TTAAGACTGAGAGG 391273 | || || ||||| Sbjct 74986 CTCAGGCTCAGAGG 74973 >seq783 Length=160263 Score = 84.2 bits (92), Expect = 9e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 391140 CAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTT 391199 || ||||||||||| |||||||| ||||| || ||||| || || | || || || || Sbjct 81245 CAGGATAAGGAAGGGATTCCTCCGGATCAGCAGCGTTTGATATTTGCTGGCAAGCAGCTG 81304 Query 391200 GAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGTA 391259 || |||||| | || |||| || || || ||| | ||||| | || || ||||| ||| Sbjct 81305 GAGGATGGACGCACGCTGGCTGACTACAACATTCAGAAGGAGTCGACTCTACACTTGGTA 81364 Query 391260 TTAAGACTGAGAGG 391273 | || || ||||| Sbjct 81365 CTCAGGCTCAGAGG 81378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975373903243772