Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq6706 138 1e-27 seq1353 123 3e-23 seq214 123 3e-23 seq1754 118 1e-21 seq1263 113 5e-20 seq3117 111 2e-19 seq4862 104 3e-17 seq2823 91.5 2e-13 seq6990 84.2 3e-11 seq4598 84.2 3e-11 >seq6706 Length=16376 Score = 138 bits (152), Expect = 1e-27 Identities = 265/386 (69%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 |||||||| || || | ||| || || ||| | |||||| | || || || || || Sbjct 12460 TCAAAGCGTCCAGGTCTAAGTAGAGCAGAATCCAAAATATCAGCTCGGTTAGTGGCAGCT 12401 Query 9255 ATGACAACAATACC--TGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312 || |||| || || |||||| | |||||||||||||||| ||||||||||| || | Sbjct 12400 ATAACAATTATTCCGGTGTTTCCCT--CAAAACCATCCATCTCAGTCAAAAGTTGATTGA 12343 Query 9313 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGCTTTCCCACGG 9372 || || |||| ||||||||| | | ||||| | | ||| |||| || | Sbjct 12342 GGGTCTGCTCCCTTTCATCATTTCCACCACCAATACCAGTTCCTCTCTGCCTTCCAACCG 12283 Query 9373 CATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGAT 9432 ||||||| ||||||| || || || || || ||| || ||| | | ||| |||| Sbjct 12282 CATCAATTTCATCAACAAACACTATGCAAGGGGCATTCTCCTTGGCCTTCTTAAACAGAT 12223 Query 9433 CGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATT 9492 | || |||| ||| || ||||| ||||||||||||||||| | | | | | || Sbjct 12222 CACGGACCCGAGAGGCACCAACACCGACAAACATCTCCACAAACTCAGACCCTG-ATATA 12164 Query 9493 G-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTA 9551 | || ||| || || || ||| || ||||| ||| ||| || | ||||||||| || Sbjct 12163 GAGAAGAAAGGCACTCCAGCTTCTCCTGCAATTGCTTTGGCAAGCAAAGTCTTACCAGTC 12104 Query 9552 CCTGGCTTACCCGCGAGGAGGGCACC 9577 || || ||| | || ||| |||| Sbjct 12103 CCAGGAGGACCAACAAGCAGGACACC 12078 >seq1353 Length=118606 Score = 123 bits (136), Expect = 3e-23 Identities = 116/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || ||||| || || || || |||||| |||||||||||||| || Sbjct 95390 GTGCAGGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAGGTGAGGCCTGGCATGAGCCC 95331 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||| | ||| | || |||||||| || || ||||||||||| ||||| || || Sbjct 95330 GCGTTTCTTGAGCCAGAAGATGGCGCAGAACGAGCCCGAGAAGAAGATGCCCTCGACGCA 95271 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAG 117432 || ||||| | ||| |||||||||||| Sbjct 95270 GGCGAACGCGACAAGACGCTCGGCGAAG 95243 >seq214 Length=259295 Score = 123 bits (136), Expect = 3e-23 Identities = 253/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Minus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 |||||||| || || | ||| | || || | |||||| | || || || || || Sbjct 154452 TCAAAGCGTCCAGGTCTAAGTAAAGCAGAGTCCAAAATATCAGCTCGGTTGGTGGCAGCA 154393 Query 9255 ATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9313 || |||| || || || ||| | ||||||||||||||||| |||||||| ||||| | Sbjct 154392 ATAACAATTATTCCAGTGTTCCCT-TCAAAACCATCCATCTCGGTCAAAAGCTGGTTCAG 154334 Query 9314 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCACC---AGCACTGCGT---TGCTTTCC 9367 || || |||| ||||||||| | |||||| | || | | | ||| |||| Sbjct 154333 GGTCTGCTCCCTTTCATCATTTCC------ACCACCGATACCAGTTCCTCTCTGCCTTCC 154280 Query 9368 CACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAA 9427 || |||||||| ||||||| || || || || ||| ||| || ||| | | ||| Sbjct 154279 AACAGCATCAATTTCATCAACAAACACTATGCAAGGTGCATTCTCCTTGGCCTTCTTAAA 154220 Query 9428 GAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9487 ||||| || || | || || ||||| ||||||||||||||||| | | | | | Sbjct 154219 CAGATCACGGACACGGGATGCACCAACACCGACAAACATCTCCACAAACTCAGAGCCCG- 154161 Query 9488 ACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9546 | || | || ||| || || || ||| || ||||| || ||| || | |||||||| Sbjct 154160 ATATAGAGAAGAAAGGCACTCCAGCTTCTCCTGCAATTGCCTTGGCAAGCAAAGTCTTAC 154101 Query 9547 CCGTACCTGG 9556 | || || || Sbjct 154100 CGGTCCCAGG 154091 >seq1754 Length=96608 Score = 118 bits (130), Expect = 1e-21 Identities = 252/370 (68%), Gaps = 16/370 (4%) Strand=Plus/Plus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 |||||||| || || | ||| | || || | |||||| | || || || || || Sbjct 22953 TCAAAGCGTCCAGGTCTAAGTAAAGCAGAGTCCAAAATATCAGCTCGGTTGGTGGCAGCA 23012 Query 9255 ATGACAACAATACCTGT-TTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9313 || |||| || || || ||| | ||||||||||||||||| |||||||| ||||| | Sbjct 23013 ATAACAATTATTCCAGTGTTCCCT-TCAAAACCATCCATCTCGGTCAAAAGCTGGTTCAG 23071 Query 9314 AGTTTGTTCCCGTTCATCATTCGCTGGCATACCACC---AGCACTGCGT---TGCTTTCC 9367 || || |||| ||||||||| | |||||| | || | | | ||| |||| Sbjct 23072 GGTCTGCTCCCTTTCATCATTTCC------ACCACCGATACCAGTTCCTCTCTGCCTTCC 23125 Query 9368 CACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAA 9427 || |||||||| ||||||| || || || || ||| ||| || ||| | | ||| Sbjct 23126 AACAGCATCAATTTCATCAACAAACACTATGCAAGGTGCATTCTCCTTGGCCTTCTTAAA 23185 Query 9428 GAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA 9487 ||||| || || | || || ||||| |||||||||||||| || | | | | | Sbjct 23186 CAGATCACGGACACGGGATGCACCAACACCGACAAACATCTCCACGAACTCAGAGCCCG- 23244 Query 9488 ACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTAC 9546 | || | || ||| || || || ||| || ||||| || ||| || | |||||||| Sbjct 23245 ATATAGAGAAGAAAGGCACTCCAGCTTCTCCTGCAATTGCCTTGGCAAGCAAAGTCTTAC 23304 Query 9547 CCGTACCTGG 9556 | || || || Sbjct 23305 CGGTCCCAGG 23314 >seq1263 Length=124836 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| |||||||| || ||||| || || || || ||||| ||||| Sbjct 20291 GGCAAAGTCGCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCC 20232 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||| || || ||||| | ||| | || |||||||| || || || |||||||| Sbjct 20231 CGGCATGAGGCCGCGTTTCTTGAGCCAGAAGATGGCGCAGAAAGATCCCGAAAAGAAGAT 20172 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAG 117432 ||||| || || || ||||| | || |||||||||||| Sbjct 20171 GCCCTCGACGCAGGCGAACGCGACGAGCCGCTCGGCGAAG 20132 >seq3117 Length=57653 Score = 111 bits (122), Expect = 2e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| |||||||| || ||||| || || || || ||||| ||||| Sbjct 28979 GCAAAGTCGCAGTGCAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAGAAAGTGAGGCCC 28920 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 |||||||| || || ||||| | ||| | || |||||||| || || || |||||||| Sbjct 28919 GGCATGAGGCCGCGTTTCTTGAGCCAGAAGATGGCGCAGAAAGATCCCGAAAAGAAGATG 28860 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAG 117432 ||||| || || || ||||| | || |||||||||||| Sbjct 28859 CCCTCGACGCAGGCGAACGCGACGAGCCGCTCGGCGAAG 28821 >seq4862 Length=32157 Score = 104 bits (114), Expect = 3e-17 Identities = 218/323 (67%), Gaps = 14/323 (4%) Strand=Plus/Plus Query 9280 CAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTG 9339 |||| || |||||||| |||| || |||||||| || || |||| || || || | Sbjct 31362 CAAAGCCGTCCATCTCCGTCAGCAGCTGGTTAATGGTCTGCTCCCTCTCGTCGTTTCC-- 31419 Query 9340 GCATACCACCA------GCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGA 9393 ||||||| |||| || ||| | || ||||| || |||||||||||||||| Sbjct 31420 ----ACCACCAAGGCCGGCACCACGCTGCCTCCCAACGGCGTCGATCTCATCAATGAAGA 31475 Query 9394 CAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCA 9453 |||| || || || | ||| | || ||||| || | ||||| || || | Sbjct 31476 CAATGCACGGCGCCTTGGCCTTGGCCTTCTCGAAGAGGTCCCTGACCCTGGATGCACCGA 31535 Query 9454 CACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATT 9513 |||| ||||| | ||| || || | | ||| | || || |||||| || | | Sbjct 31536 CACCGACAAAGAGCTCGACGAACTCGGAGGCAGCGCAGGAGAAGAAGGGCACCCCGGCCT 31595 Query 9514 CACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGG 9573 | || || | ||| || || || ||||| ||||| || || ||| ||| |||||| || Sbjct 31596 CCCCGGCGACGGCACGCGCAAGGAGAGTTTTACCTGTCCCAGGCGGGCCCACGAGGA-GG 31654 Query 9574 CACCCCGT-GGAATCTTGGCGCC 9595 || ||| | || |||||||| || Sbjct 31655 CATCCCTTGGGGATCTTGGCTCC 31677 >seq2823 Length=63626 Score = 91.5 bits (100), Expect = 2e-13 Identities = 212/317 (67%), Gaps = 2/317 (1%) Strand=Plus/Minus Query 9280 CAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTG 9339 |||| || ||||| || || | || |||||||| || || |||| ||||| || | Sbjct 63473 CAAAGCCGTCCATTTCGGTGAGCAGCTGGTTAATGGTCTGCTCCCTCTCATCGTTTCCAC 63414 Query 9340 G-CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATA 9398 | | | ||||||| || ||| | || || |||||||||||||||||||||||||| Sbjct 63413 CACCGAGC-CCAGCACCACGCTGCCTCCCGACAGCATCAATCTCATCAATGAAGACAATG 63355 Query 9399 CATGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCA 9458 || || || | || | || ||||| || | ||||| || || ||||| Sbjct 63354 CAAGGCGCCTTGGCCTTAGCCTTCTCGAAGAGGTCCCTGACCCTGGACGCACCGACACCG 63295 Query 9459 ACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCACCC 9518 ||||| | ||| || || | | ||||| || || |||||| || | || || Sbjct 63294 ACAAAGAGCTCGACGAACTCGGAGGCGGCGCAGGAGAAGAAGGGTACCCCGGCCTCCCCA 63235 Query 9519 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCC 9578 | | ||| |||||||| || || || || || || || || |||||||| ||| Sbjct 63234 GAGACGGCACGGGCGAGGAGTGTTTTGCCTGTCCCAGGTGGGCCGACGAGGAGGCATCCC 63175 Query 9579 CGTGGAATCTTGGCGCC 9595 ||| |||||||| || Sbjct 63174 TTTGGGATCTTGGCTCC 63158 >seq6990 Length=14915 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 6951 CCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCG 7010 ||||| | |||||| || || ||| |||| |||||| ||||| | | | ||||| || Sbjct 5069 CCACAGAGCGAGGACACGCCGTTCCACCCGCGCTCGCCCTACGCCGCCGCCAAGGTCGCC 5010 Query 7011 GCACATTGGCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATC 7070 || || ||| | | || ||||| ||| | ||||| || || || ||| ||| | Sbjct 5009 GCGCACTGGTACACCGTCAACTACCGAGAGGCGTACGGCCTCTTCGCCTGCAACGGCGTA 4950 Query 7071 CTCTTCAACCATGAATCACCGAGACGAGGTGCAGACTTTGTCAC 7114 ||||||||||| || |||||| | || |||| |||| ||||| Sbjct 4949 CTCTTCAACCACGAGTCACCGCGCCGCGGTGAGAACTTCGTCAC 4906 >seq4598 Length=35162 Score = 84.2 bits (92), Expect = 3e-11 Identities = 159/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 107164 CATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACC 107223 || ||| || || || |||||||||||||| || ||||||| || || | ||| | Sbjct 34617 CACCTGGGGCCTGGGAGTACCAGCATTGAAAAGCGTTGGTGAAGCATGTGTAAACCAGCG 34676 Query 107224 TTGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283 || |||||| | |||||| | | | |||| |||||||| ||| ||| || || | Sbjct 34677 CTGAGACATCAGATGGTATGTTTTGATGGCAGATTCAATGTCATCCTTGTGTATCCCCAC 34736 Query 107284 GGCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAG 107343 | || | ||| ||||||| ||| ||| |||| | | | ||| | ||| || ||| Sbjct 34737 TGAAACTCTCATTAACATGTGTTGTGGTCTTTCGACAACCTTCCCACCAAGC--TTCAAG 34794 Query 107344 A--TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 | || | |||| || || |||| |||||||| || |||| |||||| Sbjct 34795 AGGTAAGACCTCTCCAGAGTCTTGAACCCAAAGTAGTCATAATCGAAGTCCC 34846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589880436891160