Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5432 141 3e-28 seq2056 131 5e-25 seq9375 125 2e-23 seq730 123 7e-23 seq8286 111 5e-19 seq6533 111 5e-19 seq214 107 6e-18 seq4598 105 2e-17 seq1754 104 7e-17 seq446 104 7e-17 >seq5432 Length=26008 Score = 141 bits (156), Expect = 3e-28 Identities = 214/300 (71%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 251404 GCGATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGC 251463 ||||| |||||||| || | ||| |||||||| ||||| |||||| |||| ||||| Sbjct 6789 GCGATGAGACCACATTTCTCACATACATGGACTCTGTACGCATCACTCTGGTCAAATAGC 6730 Query 251464 CGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCG 251523 | |||| ||| || || ||||||| |||||||||||| | ||||||||||||| Sbjct 6729 CTTTCCTTCAGGAAAAAAGCGGCTCCGTGTGCAATCATACAATCCCTCTCCATTTCACCG 6670 Query 251524 AAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATA 251583 ||||| ||||||||||| || | | || || || || || || ||||| | | | Sbjct 6669 AAACGGAGACCACCATCACGTGAACGCCCTTCTGCTGGTTGTCGGGTGAGTATCTGGACA 6610 Query 251584 GGACCGATGGAGCGGCT--ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGA 251641 ||||| || | | |||| |||||||| ||||| |||||||| | ||||| Sbjct 6609 GGACC--ACGACCTCTTGAATGTATCTTATCATCCACCATGTGCTTGAGTCTTTGGTAAT 6552 Query 251642 ATGCGGGACCGATGAAGATGCTCGAAGGCA-TTTGCTCTCCAGTTAGAGCGTTATACATA 251700 ||| |||||| | ||| || | | | || ||| || |||||| || | || |||||| Sbjct 6551 ATGTGGGACCCAAGAAAATCATAGCGGTCAGTTTTCT-TCCAGTGTGACCATTGTACATA 6493 >seq2056 Length=85062 Score = 131 bits (144), Expect = 5e-25 Identities = 238/342 (70%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597 ||||||||| || |||||| || ||| ||||| |||||| || | | | || Sbjct 49074 ATTTCTTACAGTACCATCATATTTAACCATGATGTCCTCCATAGCTTTCACAAGTCTCCG 49015 Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657 || ||||| ||||| ||| || || |||||| ||||||| ||||| | | |||||| Sbjct 49014 TTGGATATAGCCAGTCTCAGAAGTCTTCACAGCTATATCAATCAGACCTTCTCTACCACC 48955 Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGA 302716 ||||||||||||||| | |||| || ||| ||||| || | || |||| || | Sbjct 48954 CATAGCATGGAAGAAAAATTCTTGAGG-CGTCAGCCCTTGAAGGTAAGAATTCTCCACAA 48896 Query 302717 AACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTC--TC 302774 | ||||| || || || ||| || || || ||||||| || | | || | Sbjct 48895 ATCCACGACTTTCAGGACCATAGTCATCTTTCGTGAAATGTGGCAATGTTC-GATCAATG 48837 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834 | | || ||||||||||||| || ||||| ||||||||||| | || | | |||| || Sbjct 48836 A-AACCAAATGGGATACGCTTGCCCTCAACATTCTGCTGTCCAACACAAGCAGTCATTTG 48778 Query 302835 CGAAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 |||||||| | |||||| || || || ||| | ||||| Sbjct 48777 TGAAATATTAATGAAACTGCCTTTTGAACCTGCAGTAACCAT 48736 >seq9375 Length=4316 Score = 125 bits (138), Expect = 2e-23 Identities = 231/339 (68%), Gaps = 0/339 (0%) Strand=Plus/Plus Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597 ||||||||| || |||||| | ||| ||||| |||||| || | | | || Sbjct 987 ATTTCTTACAGTACCATCATATTTGACCATGATGTCCTCCATAGCTTTCACAAGTCTCCG 1046 Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657 ||| ||||| ||||| ||| || || || || |||||||| ||||| | | |||||| Sbjct 1047 CTGGATATAGCCAGTCTCAGAAGTCTTCACGGCAGTATCAATCAGACCTTCCCTACCACC 1106 Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAA 302717 ||||||||||||||| | |||| ||| ||||| | || | ||| |||| || || Sbjct 1107 CATAGCATGGAAGAAAAATTCTTGAGGTGTCAGCCCTCGAAGGTAAGAGTTCTCCACAAA 1166 Query 302718 ACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATA 302777 ||||| || || || ||| || || || ||||||| || | | | | Sbjct 1167 TCCACGACTTTCAGGACCATAGTCATCTTTTGTGAAATGTGGCAATGTTCGATCGATAAA 1226 Query 302778 GCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGA 302837 || |||||||||| || || ||||| ||||||||||| | || | | |||| || || Sbjct 1227 ACCAAATGGGATACGTTTGCCCTCAACATTCTGCTGTCCGACACAAGCAGTCATTTGTGA 1286 Query 302838 AATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 ||| || | |||||| || || || || | ||||| Sbjct 1287 AATGTTAATGAAACTGCCTTTTGAACCGGCCGTCACCAT 1325 >seq730 Length=158410 Score = 123 bits (136), Expect = 7e-23 Identities = 233/340 (69%), Gaps = 2/340 (1%) Strand=Plus/Plus Query 302538 ATTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACG 302597 ||||||||| || |||||| || ||| ||||| |||||| || | | | || Sbjct 115798 ATTTCTTACAGTACCATCATATTTAACCATGATGTCCTCCATAGCTTTCACAAGTCTCCG 115857 Query 302598 CTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACC 302657 || |||| ||||| ||| || || |||||||||||||| ||||| | | |||||| Sbjct 115858 TTGGATATGGCCAGTCTCAGAAGTCTTCACAGCTGTATCAATCAGACCTTCTCTACCACC 115917 Query 302658 CATAGCATGGAAGAATAGCTCTTCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGA 302716 ||||||||||||||| | |||| || ||| ||||| || | || |||| || | Sbjct 115918 CATAGCATGGAAGAAAAATTCTTGAGG-CGTCAGCCCTTGAAGGTAAGAATTCTCCACAA 115976 Query 302717 AACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCAT 302776 | ||||| || || || ||| || || || ||||||| || | | Sbjct 115977 ATCCACGACTTTCAGGACCATAGTCATCTTTCGTGAAATGTGGCAATGTTCAATCAATGA 116036 Query 302777 AGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCG 302836 | || ||||||||||||| || ||||| ||||||||||| | || | | |||| || | Sbjct 116037 AACCAAATGGGATACGCTTGCCCTCAACATTCTGCTGTCCAACACAAGCAGTCATTTGTG 116096 Query 302837 AAATATTTAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 ||||||| | |||||| || || | ||| | ||||| Sbjct 116097 AAATATTAATGAAACTGCCTTTTGAATCTGCAGTAACCAT 116136 >seq8286 Length=8159 Score = 111 bits (122), Expect = 5e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 156062 GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 |||||| ||||| ||||| |||||||| | |||||| |||| || |||||||| ||| || Sbjct 972 GCCACCTTGATCAACATAACGAGCAGTATCATTGAAAACACGTAACATAGGAACAATCCC 913 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATG 156181 ||||||||| ||||| ||||| ||||||| ||||| | |||| ||| |||| Sbjct 912 ATTGGAAGTTCCATTTGTTCCCCGAATATAACTACCAGTGGCTCGAATATTGTGAACTGA 853 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 | ||||| || || | |||| || ||| |||||||| | ||||| | || Sbjct 852 AACACCAATTCCTCCAGCAGATTTGCTTATGACAGCACATTCCTTCAGAGTATCATAGAT 793 Query 156242 ACCTTCAATAGAATCATCTTCCAT 156265 || ||||| ||||||| ||| Sbjct 792 TCCCTCAATGCTGTCATCTTTCAT 769 >seq6533 Length=17200 Score = 111 bits (122), Expect = 5e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 156062 GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 |||||| ||||| ||||| |||||||| | |||||| |||| || |||||||| ||| || Sbjct 973 GCCACCTTGATCAACATAACGAGCAGTATCATTGAAAACACGTAACATAGGAACAATCCC 914 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATG 156181 ||||||||| ||||| ||||| ||||||| ||||| | |||| ||| |||| Sbjct 913 ATTGGAAGTTCCATTTGTTCCCCGAATATAACTACCAGTAGCTCGAATATTGTGAACTGA 854 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 | ||||| || || | |||| || ||| |||||||| | ||||| | || Sbjct 853 AACACCAATTCCTCCAGCAGATTTGCTTATGACAGCACATTCCTTCAGAGTATCATAGAT 794 Query 156242 ACCTTCAATAGAATCATCTTCCAT 156265 || ||||| ||||||| ||| Sbjct 793 TCCCTCAATGCTGTCATCTTTCAT 770 >seq214 Length=259295 Score = 107 bits (118), Expect = 6e-18 Identities = 341/512 (67%), Gaps = 20/512 (4%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || ||||| | |||| | | ||| || | ||| || ||||| |||| ||| || || Sbjct 154455 CTGTCAAAGCGTCCAGGTCTAAGTAAAGCAGAGTCCAAAATATCAGCTCGGTTGGTGGCA 154396 Query 288910 GCCAATACAACAATAGATTCG---GTTTGCTT-AAATCCATCCATACTTGTTAAAATTTG 288965 || |||| ||||| |||| ||| ||| ||| |||||||| || |||| || Sbjct 154395 GC-AATA--ACAATT-ATTCCAGTGTTCCCTTCAAAACCATCCATCTCGGTCAAAAGCTG 154340 Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttt 289025 || || || || ||||||||||||||| ||| | || ||| | | ||| | Sbjct 154339 GTTCAGGGTCTGCTCCCTTTCATCATTTCCACCACCG--AT-ACCAGTTCCTCTCTGCCT 154283 Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 | ||||||||||||||||| |||| || | | || || | ||| | | || | Sbjct 154282 T---CCAACAGCATCAATTTCATCAACAAACACTATGCAAGGTGCATTCTCCTTGGCCTT 154226 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 ||| | || | ||||||||||| |||| ||| ||| |||| || ||||| ||||| Sbjct 154225 CTTAAACAGATCACGGACACGGGATGCACCAACACCGACAAACATCTCCACAAACTCAGA 154166 Query 289146 AGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | |||| | || | ||| | || ||||| ||||| | |||| | || || | | Sbjct 154165 GCCCGATA-TAGAGAAGAAAGGCACTCCAGCTTCTCCTGCAATTGCCTTGGCAAGCAAAG 154107 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 ||||||| || ||||| || || | | ||||| || || || | || ||| ||| Sbjct 154106 TCTTACCGGTCCCAGGAGGACCAACAAGCAGAACACCGTTAGGAATGCGAGCACCAACAG 154047 Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCC-TCAAGTTCATATTTTGCC 289323 | || | || || |||| || || || || | |||| | ||| || | || || Sbjct 154046 CAGTGAATCTTTCTGGTTTCTTCAAGAACTCAACGACTTCCATGAAG-TCTTGCTTCGCT 153988 Query 289324 TCATC-ACATCCTGCTACATCAGCAAAAGTAA 289354 ||||| ||| || || |||||| |||| |||| Sbjct 153987 TCATCGACA-CCAGCAACATCATCAAATGTAA 153957 >seq4598 Length=35162 Score = 105 bits (116), Expect = 2e-17 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 156062 GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 |||||| ||||| ||||| |||||||| | |||||| |||| || |||||||| ||| || Sbjct 34309 GCCACCTTGATCAACATAACGAGCAGTATCATTGAAAACACGTAACATAGGAACAATCCC 34368 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAA 156177 ||||||||| ||||| ||||| ||||||| ||||| | |||| ||| |||| Sbjct 34369 ATTGGAAGTTCCATTTGTTCCCCGAATATAACTACCAGTAGCTCGAATATTGTGAA 34424 >seq1754 Length=96608 Score = 104 bits (114), Expect = 7e-17 Identities = 340/512 (66%), Gaps = 20/512 (4%) Strand=Plus/Plus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 || ||||| | |||| | | ||| || | ||| || ||||| |||| ||| || || Sbjct 22950 CTGTCAAAGCGTCCAGGTCTAAGTAAAGCAGAGTCCAAAATATCAGCTCGGTTGGTGGCA 23009 Query 288910 GCCAATACAACAATAGATTCG---GTTTGCTT-AAATCCATCCATACTTGTTAAAATTTG 288965 || |||| ||||| |||| ||| ||| ||| |||||||| || |||| || Sbjct 23010 GC-AATA--ACAATT-ATTCCAGTGTTCCCTTCAAAACCATCCATCTCGGTCAAAAGCTG 23065 Query 288966 ATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttt 289025 || || || || ||||||||||||||| ||| | || ||| | | ||| | Sbjct 23066 GTTCAGGGTCTGCTCCCTTTCATCATTTCCACCACCG--AT-ACCAGTTCCTCTCTGCCT 23122 Query 289026 tttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 | ||||||||||||||||| |||| || | | || || | ||| | | || | Sbjct 23123 T---CCAACAGCATCAATTTCATCAACAAACACTATGCAAGGTGCATTCTCCTTGGCCTT 23179 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 ||| | || | ||||||||||| |||| ||| ||| |||| || || || ||||| Sbjct 23180 CTTAAACAGATCACGGACACGGGATGCACCAACACCGACAAACATCTCCACGAACTCAGA 23239 Query 289146 AGCGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | |||| | || | ||| | || ||||| ||||| | |||| | || || | | Sbjct 23240 GCCCGATA-TAGAGAAGAAAGGCACTCCAGCTTCTCCTGCAATTGCCTTGGCAAGCAAAG 23298 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 ||||||| || ||||| || || | | ||||| || || || | || ||| ||| Sbjct 23299 TCTTACCGGTCCCAGGAGGACCAACAAGCAGAACACCGTTAGGAATGCGAGCACCAACAG 23358 Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCC-TCAAGTTCATATTTTGCC 289323 | || | || || |||| || || || || | |||| | ||| || | || || Sbjct 23359 CAGTGAATCTTTCTGGTTTCTTCAAGAACTCAACGACTTCCATGAAG-TCTTGCTTCGCT 23417 Query 289324 TCATC-ACATCCTGCTACATCAGCAAAAGTAA 289354 ||||| ||| || || |||||| |||| |||| Sbjct 23418 TCATCGACA-CCAGCAACATCATCAAATGTAA 23448 >seq446 Length=200473 Score = 104 bits (114), Expect = 7e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 156062 GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 |||||| ||||| ||||| |||||||| | |||||| |||| || |||||||| ||| || Sbjct 90948 GCCACCTTGATCAACATAACGAGCAGTATCATTGAAAACACGTAACATAGGAACAATCCC 90889 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGA 156176 ||||||||| ||||| ||||| ||||||| ||||| | |||| ||| ||| Sbjct 90888 ATTGGAAGTTCCATTTGTTCCCCGAATATAACTACCAGTAGCTCGAATATTGTGA 90834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471560966064233