Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq2732 91.5 2e-13 seq5432 86.0 8e-12 >seq2732 Length=66941 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 192984 GGTCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGG 193042 |||||||| ||||| || |||| || ||||| ||| | || |||| | ||||||| Sbjct 61608 GGTCAGTT-CGTATTCCACAAATTGGAGATAAGTTTAGCAGTAGACATGGTC-AAAAAGG 61551 Query 193043 AACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACC 193102 |||| ||| |||| ||| ||||||| || ||||||| |||| | ||| || || Sbjct 61550 AACTGTTGGAATGACATATACACAAGAGGACATGCCATGGACAATTGAAGGCATCACGCC 61491 Query 193103 AGATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGC 193162 ||||||||| | || ||| || |||||| ||| | ||||| ||| || | |||| Sbjct 61490 TGATATTATTGTGAACCCACATGCTATTCCATCCCGTATGACTATTGGGCAGCTGATTGA 61431 Query 193163 TACTGTTATGGGTAAA 193178 | ||||||||||| Sbjct 61430 GTGTATTATGGGTAAA 61415 >seq5432 Length=26008 Score = 86.0 bits (94), Expect = 8e-12 Identities = 139/196 (71%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 192984 GGTCAGTTACGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGG 193042 |||||||| |||||||| |||| || ||||| ||| | || |||| | | ||||| Sbjct 5945 GGTCAGTT-CGTATACCACAAATTGGAGATAAGTTTAGCAGTAGACATGGTC-AGAAAGG 6002 Query 193043 AACTTGTGGTATGATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACC 193102 |||| || |||| || ||||||| || ||||||| |||| | ||| || ||| Sbjct 6003 AACTGTCGGAATGACATACACACAAGAGGACATGCCATGGACAATTGAAGGCATCACACC 6062 Query 193103 AGATATTATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTGC 193162 ||||||||| | |||||| || |||||| ||| | ||||| || ||| | || | Sbjct 6063 TGATATTATTGTGAATCCACATGCTATTCCATCCCGTATGACTATCGGTCAGCTGATCGA 6122 Query 193163 TACTGTTATGGGTAAA 193178 | ||||||||||| Sbjct 6123 GTGTATTATGGGTAAA 6138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628424278986240