Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20matrella_20[genbank_20GCA_5F001602295.1_202016-03-15] 13,609 sequences; 563,438,595 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3775 93.3 3e-14 seq3496 89.7 3e-13 seq559 89.7 3e-13 seq990 87.8 1e-12 seq212 87.8 1e-12 seq1222 86.0 4e-12 seq1015 86.0 4e-12 seq8345 82.4 5e-11 seq4941 82.4 5e-11 >seq3775 Length=45385 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | ||| | ||| | || || ||| ||| || || |||||||| |||| Sbjct 38 ACCACCCCTGAGACGGAGCACTAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 97 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || |||| |||| || || || || || || | ||||||||| || | || Sbjct 98 GAGGGTACGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGG 157 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || || || | | | ||| | ||||| |||||||| Sbjct 158 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGA-CGTTGTCGATTGTGTCAGATGATTCCA 216 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || ||||| || | || || ||||||||||||||| Sbjct 217 CCTCAAGGGTGATGGTCTTACCGGTGAGGGTCTTGACAAAGATCTGCATA 266 >seq3496 Length=52490 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || || ||| || || |||||||| |||| ||| ||||| |||| || Sbjct 27191 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTC 27250 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 27251 CAGCTGCTTACCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 27310 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | ||| | |||||| || ||||| || | ||||||||| | Sbjct 27311 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 27369 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 27370 TGCCCGTCAGGGTCTTCACGAAGATCTGCAT 27400 >seq559 Length=180664 Score = 89.7 bits (98), Expect = 3e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || || ||| || || |||||||| |||| ||| ||||| |||| || Sbjct 32335 CACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGCGTGCGGCCGTCCTC 32276 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||||| || |||| |||||||| || |||| | || || ||||| Sbjct 32275 CAGCTGCTTGCCGGCGAAGATCAGCCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 32216 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | ||| | |||||| || ||||| || | ||||||||| | Sbjct 32215 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGCGTGATCGTCT 32157 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 32156 TGCCCGTCAGGGTCTTCACGAAGATCTGCAT 32126 >seq990 Length=138715 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||||| || || || || || || |||||||| || | Sbjct 23088 CCACCACGGAGACGAAGCACCAAGTGGAGGGTAGATTCCTTCTGAATGTTGTAGTCCGCC 23147 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || |||||||||| ||||||||| || | || Sbjct 23148 AGGGTGCGGCCATCCTCCAGCTGCTTACCAGCAAAAATCAGACGCTGCTGGTCCGGAGGG 23207 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACG 33702 | || || ||||| || ||| |||| || | |||||| || ||||| Sbjct 23208 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCAATGGTGTCCGAAGACTCCACT 23267 Query 33703 TCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || | ||| || ||||||||||||||| Sbjct 23268 TCTAAGGTGATGGTCTTGCCAGTAAGCGTCTTCACAAAGATCTGCATA 23315 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | || ||||| | || || | || Sbjct 23340 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGC 23399 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||| ||| | || | ||| || ||||| || || Sbjct 23400 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTA 23459 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| ||| | |||||| || ||||| |||| |||||| || || || || Sbjct 23460 GCCTTCA-CATTGTCGATGGTGTCCGAGGACTCCACCTCAAGCGTGATGGTCTTGCCAGT 23518 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || |||||||||||||| Sbjct 23519 GAGGGTCTTGACAAAGATCTGCAT 23542 >seq212 Length=258318 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 |||||| || || ||| || || || |||||||| || | || ||||| | || || Sbjct 16693 CACCAAGTGGAGGGTGGATTCCTTCTGAATGTTGTAGTCCGCCAGGGTGCGGCCATCCTC 16752 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || || |||||||||| ||||||||| || | || | || || ||||| Sbjct 16753 CAGCTGCTTACCAGCAAAAATCAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTG 16812 Query 33660 AATTTTCTGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || ||| |||| || | |||||| || ||||| || | ||||| || || Sbjct 16813 GATCTTCGCCTTCACGTTATCAATGGTGTCCGAAGACTCCACCTCTAAGGTGATGGTCTT 16872 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||| || ||||||||||||||| Sbjct 16873 GCCAGTAAGCGTCTTCACAAAGATCTGCATA 16903 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| || | || ||||| | || || | ||| Sbjct 16928 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCAAGCTGT 16987 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||| ||| | || | ||| || ||||| || || Sbjct 16988 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTA 17047 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| ||| | |||||| || ||||| |||| ||| || || || || || Sbjct 17048 GCCTTCA-CATTGTCGATGGTGTCCGAGGACTCCACCTCAAGCGTAATGGTCTTGCCAGT 17106 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || |||||||||||||| Sbjct 17107 GAGGGTCTTGACAAAGATCTGCAT 17130 >seq1222 Length=126723 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| |||| ||| ||||| |||| || Sbjct 6991 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 6932 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || |||||||| || || | |||||||| || |||| | || || ||||| Sbjct 6931 GAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 6872 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | ||| | |||||| || ||||| || | |||||| || | Sbjct 6871 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCT 6813 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 6812 TCCCCGTCAGGGTCTTCACGAAGATCTGCAT 6782 >seq1015 Length=139126 Score = 86.0 bits (94), Expect = 4e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| ||| || || |||||||| |||| ||| ||||| |||| || Sbjct 101337 CACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCGTCCTC 101396 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | || |||||||| || || | |||||||| || |||| | || || ||||| Sbjct 101397 GAGCTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTG 101456 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| | | ||| | |||||| || ||||| || | |||||| || | Sbjct 101457 GATCTTGGCCTTCA-CGTTGTCGATGGTGTCCGAGGACTCCACCTCCAACGTGATGGTCT 101515 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | || || || ||||||||||| Sbjct 101516 TCCCCGTCAGGGTCTTCACGAAGATCTGCAT 101546 >seq8345 Length=7904 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| | ||||| || || || ||| || |||||||||||||| | Sbjct 7489 CCACCCCTGAGACGGAGCACCAGGTGGAGGGTAGACTCCTTCTGTATGTTGTAATCAGCA 7548 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 |||||||| | || || | || || |||||||| || | | |||||| || | || Sbjct 7549 AGTGTGCGCCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGG 7608 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || | | || | ||| | |||||| || ||||| Sbjct 7609 ATGCCCTCCTTGTCCTGGATCTT-AGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCAC 7667 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | || || ||||||||||||||| Sbjct 7668 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATCTGCATA 7716 >seq4941 Length=31460 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| || || |||||||| |||| ||| ||||| | || || | || Sbjct 20258 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCATCCTCAAGCTGC 20317 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || || || || || | ||||||||| ||| | || | || || ||||| ||||| Sbjct 20318 TTGCCAGCGAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTTTG 20377 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 |||| ||| ||| | |||||| ||| || || || | |||||| || || || || Sbjct 20378 GCCTTCA-CATTGTCGATGGTGTCAGATGACTCGACCTCCAGCGTGATGGTCTTTCCCGT 20436 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | || || || ||||||||||| Sbjct 20437 GAGGGTCTTCACGAAGATCTGCAT 20460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328649481257280