Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq2252 86.0 9e-12 >seq2252 Length=53314 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||||||||| || || | ||||| || | || || ||||| || |||||||| Sbjct 37742 GTTCCACCTCTGAGCCTCAGGACCAAGTGAAGTGTCGACTCTTTTTGAATGTTATAATCA 37801 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | | ||||| | ||| || ||||| || ||||||||||||| |||||||| || || Sbjct 37802 GCTAATGTTCTTCCATCTTCCAATTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGG 37861 Query 146168 GGAATTCCTTCTTTATCTTG 146187 ||||| || || || || || Sbjct 37862 GGAATGCCCTCCTTGTCCTG 37881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743420187253760