Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq927 82.4 6e-11 >seq927 Length=112269 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||| | ||||||||||| || || |||||||| || | ||| | ||||| Sbjct 58433 CACCAGGTGGAGGGTAGACTCCTTCTGTATGTTGTAATCAGCAAGTGTGCGCCCATCCTC 58374 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 ||||| || || ||| | ||||| |||||||| ||| || | |||||| ||||| Sbjct 58373 AAGCTGCTTGCCGGCAAAGATAAGCCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 58314 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 || || || || | | | | || || || |||| || | ||| ||||| || Sbjct 58313 GATCTTAGCCTTGACGTTGTCAATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTT 58254 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | || |||||||| || ||||| Sbjct 58253 GCCGGTGAGGGTCTTGACAAAGATCTGCAT 58224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414515058818632