Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1683 123 2e-23 >seq1683 Length=74186 Score = 123 bits (136), Expect = 2e-23 Identities = 176/243 (72%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 5503 GCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTC 5562 ||| ||||| ||||| || || |||| | | || |||||||| | ||||||| | Sbjct 37879 GCCGGTGGATCCGAACCCACCCTCGCCGCGCACGGTGGCGTCCAGGTCCTCCACCTCCGC 37820 Query 5563 CACATCGGGGAACGC-AGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTA 5621 || || || || | | | |||| ||||| |||||| || |||||||| | ||| | Sbjct 37819 GACCTCCGGCGTGGCGATCAC-CTCGACGATCATCTGCGCGATGCGGTCGCCGGGCTTGA 37761 Query 5622 CCTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTC 5679 | |||| || || |||| |||||| || | || ||||| |||||||||||| Sbjct 37760 CGGCGAAGTCCACGT--CCGAGTGGTTGAAGAGGATGACCCCCACCGGGCCGCGGTAGTC 37703 Query 5680 GGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGG 5739 ||||| |||||||| ||||||||||||||| ||||||| | ||| || ||||| || || Sbjct 37702 CGCGTCGATCACGCCGGCGCCCACGTCGATGGAGTGCTTCAGCGCGAGCCCGGACCGCGG 37643 Query 5740 AGC 5742 || Sbjct 37642 CGC 37640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429994502560736