Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1689 100 6e-16 >seq1689 Length=72926 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || ||||| || || | || | || | ||||| ||| || |||||| |||||| Sbjct 2105 ATCCCTCCTCTGAGGCGCAGGACAAGGTGAAGAGTAGACTCCTTCTGGATATTGTAATCA 2164 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||||| || |||| || | ||| || ||||||||||| | || ||| || || ||| Sbjct 2165 GCCAATGTGCGCCCATCCTCGAGTTGCTTCCCAGCAAAGATGAGTCGCTGCTGGTCTGGT 2224 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || || || || || || |||||| || | ||||| || Sbjct 2225 GGGATGCCCTCCTTGTCCTGGATCTTTGCCTTCACATTATCGATTGTGTCTGAGCTCTCA 2284 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || |||||||| || || ||||| | || || | ||| |||||||| Sbjct 2285 ACCTCAAGAGTAATAGTCTTTCCAGTGAGAGTCTTCACAAAGATCTGCAT 2334 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| || || || | || | || | ||| | ||| || ||| || |||||| Sbjct 2789 ATTCCACCCCTCAGGCGAAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCA 2848 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | ||||| || |||| || | || ||||||||||| || | ||||| || || || Sbjct 2849 GCCAATGTACGGCCATCTTCTAGCTGCTTACCAGCAAAAATGAGCCTCTGCTGGTCCGGG 2908 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 ||||| || || ||||| || || || || ||||| | || | || || || Sbjct 2909 GGTATACCCTCCTTATCCTGAATCTTGGCCTTAACATTGTTGATCGTGTCCGAGCTCTCA 2968 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || ||||| ||||| || ||||| | ||| || | ||||||||||| Sbjct 2969 ACCTCGAGAGTGATGGTCTTGCCAGTCAGTGTCTTGACGAATATCTGCAT 3018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984335851207800