Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1689 87.8 3e-12 >seq1689 Length=72926 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || |||||||||||||| | ||||| ||||| || ||||| || || ||||| || || Sbjct 2873 TGCTTACCAGCAAAAATGAGCCTCTGCTGGTCCGGGGGTATACCCTCCTTATCCTGAATC 2932 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || ||||| | || || || || || || || ||||| ||||| || ||| Sbjct 2933 TTGGCCTTAACATTGTTGATCGTGTCCGAGCTCTCAACCTCGAGAGTGATGGTCTTGCCA 2992 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 || | ||| || | |||||||||||| Sbjct 2993 GTCAGTGTCTTGACGAATATCTGCAT 3018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905006701322400