Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15] 11,428 sequences; 397,009,957 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1709 89.7 1e-12 >seq1709 Length=73423 Score = 89.7 bits (98), Expect = 1e-12 Identities = 132/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 305306 AGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATG 305365 || ||| | |||||| ||||| ||||| ||||| |||||||| || || |||||| Sbjct 9075 AGGCATCTCAATGACGGTGATTTTGTTCTTTTCAACCGGCAACCAAGTCTTCACAAAATG 9134 Query 305366 TCTATGATGGCTCATAAAGTCAAAGTATTAT--CTGGATTGACATTTCGATTAAATGTAA 305423 ||||| |||| ||| | |||| ||||| || | || || || || ||| | Sbjct 9135 TCTATTATGGGGCATCGAATCAAG--ATTATGCCTTACTCAACTTTCCGGTTGAATTTGT 9192 Query 305424 GTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTC 305483 || | | || || ||||| |||||||| || |||||||||||||||||||| || | Sbjct 9193 CTGTCACTTCCCCATACAATGCTGATTTTGACGGGGATGAAATGAATATGCATGTCCCCC 9252 Query 305484 AATCA 305488 | ||| Sbjct 9253 AGTCA 9257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186639025386308