Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Zoysia_20pacifica_20[genbank_20GCA_5F001602315.1_202016-03-15]
11,428 sequences; 397,009,957 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq84 174 4e-38
seq5287 156 1e-32
seq2976 156 1e-32
seq1507 156 1e-32
seq1785 154 4e-32
seq1689 152 1e-31
seq951 147 5e-30
seq927 147 5e-30
seq238 140 8e-28
seq2252 93.3 1e-13
seq1203 89.7 1e-12
seq7 89.7 1e-12
seq3647 87.8 4e-12
seq2379 87.8 4e-12
seq132 87.8 4e-12
>seq84
Length=349560
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || |||||||| |||||||| ||| |||
Sbjct 20848 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAGTCCTCGGAC 20907
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || |||||||||||||||||
Sbjct 20908 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 20967
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || |||||||| ||||| | || ||||| || || ||| ||
Sbjct 20968 CGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGGCGCACCCTTGCTGACTACAACATC 21027
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 21028 CAGAAGGAGTCCACCCTCCACCTGGT 21053
Score = 163 bits (180), Expect = 7e-35
Identities = 167/218 (77%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || |||||||| |||||||| || ||
Sbjct 21076 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGTCTTCTGAT 21135
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || |||||||| ||||||||
Sbjct 21136 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAGCAG 21195
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| |||||||||||||| || ||||| || || || | || |||||||| || ||| ||
Sbjct 21196 CGTCTTATCTTCGCCGGCAAGCAGCTAGAGGACGGGCGCACCCTTGCCGACTACAACATC 21255
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || || || || || || || || | |||||||
Sbjct 21256 CAGAAGGAGTCCACCCTCCACCTGGTGCTCCGACTCAG 21293
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| || || || |||||||| |||||||| || |||
Sbjct 21532 CAGATTTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGTCTTCTGAC 21591
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| ||||| ||||| |||||||||||
Sbjct 21592 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 21651
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || |||||||| || || ||||| || || || | || ||||| || || ||| ||
Sbjct 21652 AGGCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGGCGCACCCTTGCTGACTACAACATC 21711
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 21712 CAGAAGGAGTCCACCCTTCACCTTGT 21737
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || || |||||||| |||||||| || |||
Sbjct 21304 CAGATCTTTGTTAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTGGAGTCTTCTGAC 21363
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 21364 ACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 21423
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| | |||||||| || || |||||||| || || | || ||||| || || ||| ||
Sbjct 21424 AGGTTGATCTTCGCTGGCAAGCAGCTCGAGGACGGGCGTACCCTTGCTGACTACAACATC 21483
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 21484 CAGAAGGAGTCCACCCTCCACCTGGT 21509
>seq5287
Length=9303
Score = 156 bits (172), Expect = 1e-32
Identities = 164/215 (76%), Gaps = 3/215 (1%)
Strand=Plus/Plus
Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974
||||||| | || |||||||| || || || || || |||||||| || ||||||||
Sbjct 5180 AAAATGC---AGATCTTCGTGAAGACCCTGACGGGCAAGACGATCACGCTGGAGGTGGAG 5236
Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034
||| ||||||||||| ||||| || ||||| |||||||| || || ||||| |||
Sbjct 5237 TCCTCGGACACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCG 5296
Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094
|||||||| || || ||||||||||| || ||||| || || || | || || |||||
Sbjct 5297 GACCAGCAGCGGCTGATCTTCGCCGGTAAGCAGCTGGAGGACGGCCGCACGCTCGCCGAC 5356
Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| ||| |||| || || || || ||||| || ||
Sbjct 5357 TACAACATCCAGAAGGAGTCGACCCTGCACCTGGT 5391
>seq2976
Length=39079
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||| | |||||||| ||| |||
Sbjct 26290 CAGATCTTCGTGAAGACCCTGACGGGGAAGACCATCACGTTGGAGGTGGAGTCCTCGGAC 26349
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || ||||| |||||||||||
Sbjct 26350 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 26409
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||||||||| |||||||| || || | || || ||||| || ||| ||
Sbjct 26410 CGCCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACTACAACATC 26469
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 26470 CAGAAGGAGTCCACGCTGCACCTGGT 26495
>seq1507
Length=80756
Score = 156 bits (172), Expect = 1e-32
Identities = 158/206 (77%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || |||||||| || |||||||| ||| |||
Sbjct 30391 CAGATCTTCGTGAAGACCCTGACGGGCAAGACGATCACGCTGGAGGTGGAGTCCTCGGAC 30450
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || ||||| |||||||||||
Sbjct 30451 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 30510
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| || || || | || || ||||| || ||| ||
Sbjct 30511 CGGCTGATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGCACGCTCGCCGACTACAACATC 30570
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| || ||
Sbjct 30571 CAGAAGGAGTCGACCCTGCACCTGGT 30596
>seq1785
Length=68507
Score = 154 bits (170), Expect = 4e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| || || || ||||| || |||||||| ||| |||
Sbjct 64663 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACGCTTGAGGTGGAGTCCTCGGAC 64722
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || || || |||||||||||
Sbjct 64723 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 64782
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || || || || ||||| | || ||||| || || ||| ||
Sbjct 64783 CGTCTTATCTTCGCTGGCAAGCAACTTGAGGATGGCCGAACCCTTGCTGACTACAACATC 64842
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
|| || || || || || || || || |||| |||||
Sbjct 64843 CAGAAGGAGTCCACTCTCCACCTCGTCCTGAGGCTCAG 64880
Score = 138 bits (152), Expect = 3e-27
Identities = 154/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || || || || || |||||||| ||| |||
Sbjct 64891 CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATTACGCTTGAGGTGGAGTCCTCGGAC 64950
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || || ||||| ||||||||
Sbjct 64951 ACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAGCAG 65010
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || |||||||| || ||||| | || ||||| || || ||| ||
Sbjct 65011 CGTCTCATCTTCGCTGGCAAACAGCTTGAGGATGGCCGCACCCTTGCTGACTACAACATC 65070
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 65071 CAGAAGGAGTCCACCCTCCACCTTGT 65096
Score = 127 bits (140), Expect = 5e-24
Identities = 152/205 (74%), Gaps = 1/205 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || || || |||||| | |||||||| || |||
Sbjct 65119 CAGATCTTTGTGAAGACGCTTACTGGCAAGACCATCACCTTAGAGGTGGAGTCTTCGGAC 65178
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || |||||| |||||||| || || |||||||||||||||||
Sbjct 65179 ACCATTGATAACGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 65238
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || || || || || || ||||| || ||||| | || || || || || ||| |
Sbjct 65239 CGTCTGATTTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCCTGGCGGACTACAACATT 65298
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || ||||| || || || ||||
Sbjct 65299 CAGAAGGAATCCACCCTCCA-CTTG 65322
>seq1689
Length=72926
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| |||||||| ||||| || || || || ||||| || |||||||||
Sbjct 2331 CAGATCTTTGTGAAGACTCTCACTGGAAAGACTATTACTCTTGAGGTTGAGAGCTCAGAC 2272
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || |||||| |||||||| || || ||||| || ||||||||
Sbjct 2271 ACAATCGATAATGTGAAGGCAAAGATCCAGGACAAGGAGGGCATCCCACCAGACCAGCAG 2212
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| ||||| || || || || ||||| ||||| | || | || ||||| || ||
Sbjct 2211 CGACTCATCTTTGCTGGGAAGCAACTCGAGGATGGGCGCACATTGGCTGATTACAATATC 2152
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || || || ||||| || | ||||||
Sbjct 2151 CAGAAGGAGTCTACTCTTCACCTTGTCCTGCGCCTCAGA 2113
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || |||||||| || || || | ||||| || ||||| |||
Sbjct 2559 CAGATATTTGTGAAGACCCTTACAGGAAAGACAATAACATTGGAGGTTGAGAGCTCTGAC 2500
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || ||||| |||||||||||||||||| || ||||| |||||||||||
Sbjct 2499 ACTATTGACAATGTCAAGGCAAAGATTCAGGACAAAGAGGGCATCCCCCCGGACCAGCAG 2440
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || |||||||| ||||| ||||| ||||| || | || || || || || ||| ||
Sbjct 2439 AGGCTCATCTTCGCTGGAAAGCAGCTTGAAGACGGCCGCACACTGGCAGACTACAACATC 2380
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 2379 CAGAAGGAGTCTACCCTTCACCTTGT 2354
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || ||||| |||||||| || ||||| |||
Sbjct 3015 CAGATATTCGTCAAGACACTGACTGGCAAGACCATCACTCTCGAGGTTGAGAGCTCGGAC 2956
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||| | || || || ||||||||||| || || || || || |||||||||||
Sbjct 2955 ACGATCAACAATGTTAAGGCCAAGATTCAGGATAAGGAGGGTATACCCCCGGACCAGCAG 2896
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || || || || || || ||||| |||||||| | || | || ||||| ||| ||
Sbjct 2895 AGGCTCATTTTTGCTGGTAAGCAGCTAGAAGATGGCCGTACATTGGCTGATTACAACATC 2836
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 2835 CAGAAGGAGTCGACTCTCCACCTTGT 2810
>seq951
Length=113133
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || ||||| || |||||||| ||| |||
Sbjct 26580 CAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACGCTGGAGGTGGAGTCCTCGGAC 26639
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||| || ||||| |||||||| || || ||||| |||||||||||
Sbjct 26640 ACCATCGACAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGCAG 26699
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || |||||||| || || | || || ||||| || ||| ||
Sbjct 26700 CGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGGCGCACGCTCGCCGACTACAACATC 26759
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 26760 CAGAAGGAGTCCACCCTCCACCTGGT 26785
>seq927
Length=112269
Score = 147 bits (162), Expect = 5e-30
Identities = 156/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || || |||||||| |||||||| || |||
Sbjct 58227 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTCTGAC 58286
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || |||||||||||||||||
Sbjct 58287 ACCATTGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAG 58346
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| |||||||| ||||| || ||||| || ||||| | || ||||| ||||| ||| |
Sbjct 58347 AGGCTTATCTTTGCCGGCAAGCAGCTTGAGGATGGGCGCACACTTGCTGATTACAACATA 58406
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 58407 CAGAAGGAGTCTACCCTCCACCTGGT 58432
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| || || || |||||||| |||||||| || |||
Sbjct 57543 CAGATCTTTGTGAAGACCCTCACCGGCAAGACTATCACCCTTGAGGTGGAGTCTTCTGAC 57602
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || |||||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 57603 ACAATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 57662
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
| || |||||||| || || |||||||| ||||| | || ||||| || || ||| ||
Sbjct 57663 AGGCTCATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGTACCCTTGCTGACTACAACATC 57722
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 57723 CAGAAGGAGTCCACCCTCCACCTGGT 57748
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || || |||||||| |||||||| || |||
Sbjct 57999 CAGATCTTTGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCTTCTGAC 58058
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || || ||||| ||||| |||||||| || || ||||| ||||||||||||
Sbjct 58059 ACCATTGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAA 58118
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| | || |||||||| || ||| ||
Sbjct 58119 CGTCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCCGACTACAACATC 58178
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 58179 CAGAAGGAGTCCACCCTCCACCTGGT 58204
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || ||||| || || || |||||||| ||||| || || |||
Sbjct 57771 CAGATCTTTGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTTGAGTCTTCTGAC 57830
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 57831 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATACCCCCGGACCAGCAG 57890
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || || || | || || ||||| || ||| ||
Sbjct 57891 CGTCTCATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGTACCCTCGCCGACTACAACATC 57950
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 57951 CAGAAGGAGTCCACCCTCCACCTGGT 57976
Score = 129 bits (142), Expect = 1e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || | || || || || ||||| || ||||| || ||||| |||
Sbjct 58455 CAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACACTGGAGGTTGAGAGCTCCGAC 58514
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || || ||||| |||||||| ||||| ||||| |||||||||||
Sbjct 58515 ACTATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAGCAG 58574
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| | ||||| || || || ||| |
Sbjct 58575 CGTCTCATCTTTGCAGGGAAGCAGCTGGAGGATGGCCGCACTCTCGCTGACTACAACATT 58634
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || |||||
Sbjct 58635 CAGAAGGAGTCCACCCTCCACCTTGT 58660
>seq238
Length=227787
Score = 140 bits (154), Expect = 8e-28
Identities = 151/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || ||||| ||||| || ||||| || ||||| || || |||
Sbjct 51910 CAGATCTTCGTGAAGACCCTCACTGGAAAGACCATCACGCTGGAGGTCGAGTCATCTGAC 51851
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || ||||| |||||||||||
Sbjct 51850 ACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 51791
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| |||||||| || || ||||| || ||||| | || || || || || ||| ||
Sbjct 51790 CGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTACAACATC 51731
Query 178104 CAAAAAGAATCAACACTGCA 178123
|| || || || || || ||
Sbjct 51730 CAGAAGGAGTCCACCCTCCA 51711
Score = 132 bits (146), Expect = 1e-25
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || || || |||||||| |||||||| || |||
Sbjct 50248 CAGATCTTTGTGAAGACCCTTACTGGCAAGACCATCACCCTGGAGGTGGAGTCTTCGGAC 50189
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || ||||| |||||||| || || ||||| |||||||||||
Sbjct 50188 ACCATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAG 50129
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| || ||||| | || || || || || ||| ||
Sbjct 50128 CGTCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCGCAGACTACAACATC 50069
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 50068 CAGAAGGAGTCCACCCTCCACCTGGT 50043
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037
|| ||||||||||| || || || ||||| |||||||| || || ||||| ||||||
Sbjct 50650 TCTGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 50591
Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTAT 178097
||||| ||||| |||||||| || || ||||| || ||||| | || || || || ||
Sbjct 50590 CAGCAGCGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTAC 50531
Query 178098 AACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
||| |||| || || || || || || ||||| ||||||||||
Sbjct 50530 AACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGAGACTCAG 50487
Score = 125 bits (138), Expect = 2e-23
Identities = 126/164 (77%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037
|| ||||||||||| || || || ||||| |||||||| || || ||||| ||||||
Sbjct 51690 TCTGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGAC 51631
Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTAT 178097
||||| ||||| |||||||| || || ||||| || ||||| | || || || || ||
Sbjct 51630 CAGCAGCGACTCATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACCCTCGCTGACTAC 51571
Query 178098 AACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAG 178141
||| |||| || || || || || || ||||| ||||||||||
Sbjct 51570 AACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGAGACTCAG 51527
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || ||||| || || || ||||| | ||||| || || |||
Sbjct 51516 CAGATTTTTGTCAAGACCCTCACCGGCAAGACCATCACTTTGGAGGTTGAGTCATCTGAC 51457
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| || ||||| |||||||| || || ||||| |||||||||||
Sbjct 51456 ACCATTGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCGGACCAGCAG 51397
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| || ||||| | || || || || || ||| ||
Sbjct 51396 CGTCTCATCTTTGCTGGCAAGCAGCTTGAGGATGGTCGCACCCTCGCAGACTACAACATC 51337
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 51336 CAGAAGGAGTCCACCCTCCACCTGGT 51311
>seq2252
Length=53314
Score = 93.3 bits (102), Expect = 1e-13
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 178009 TTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGC 178068
|||||||||| || || || || || ||||||||| | || || || || || || ||
Sbjct 37883 TTCAGGACAAGGAGGGCATTCCCCCAGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAAT 37824
Query 178069 TCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128
| ||||||||||| || | || ||||||||| | |||||||| || ||||| || | |
Sbjct 37823 TGGAAGATGGAAGAACATTAGCTGATTATAACATTCAAAAAGAGTCGACACTTCACTTGG 37764
Query 178129 TTTTGAGACTCAGA 178142
| |||| ||||||
Sbjct 37763 TCCTGAGGCTCAGA 37750
>seq1203
Length=97999
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || || || || || |||||||||||||| || ||| |||
Sbjct 46860 CAGATCTTCGTGAAGACCCTGACCGGGAAGACCATCACCCTCGAGGTCGAGAGCAGCGAC 46919
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||||||| || |||||| ||||| |||||||| ||||| ||
Sbjct 46920 ACCATCGACAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTAT 46963
>seq7
Length=814678
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || || ||||| || || ||||| |||||||| || ||| |||
Sbjct 314275 CAGATCTTCGTGAAGACGCTGACAGGGAAGACCATCACTCTCGAGGTCGAGAGCAGCGAC 314334
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027
|||||||| |||||||| ||||| |||||||| ||||| ||
Sbjct 314335 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAAGGTAT 314378
>seq3647
Length=26737
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || || ||||| ||||| |||||||| || ||| |||
Sbjct 23713 CAGATCTTCGTGAAGACGTTGACGGGGAAAACCATCACTCTCGAGGTCGAGAGCAGCGAC 23654
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| ||||||||| ||||| |||||||| |||||
Sbjct 23653 ACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGG 23613
>seq2379
Length=50633
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||||||||||||||||||||| || || ||||| ||||| || ||||| || ||||| |
Sbjct 31180 AGGAATCCCTCCGGACCAGCAGCGTCTGATCTTTGCCGGGAAGCAGCTGGAGGATGGCCG 31121
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||| ||||||| || || || || || || ||
Sbjct 31120 CACCCTGGCAGACTACAACATCCAAAAGGAGTCCACCCTCCACCTCGT 31073
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||| || | || || || || ||||| |||||||| || ||| |||
Sbjct 31366 CAGATCTTCGTGAAGACGTTGACGGGGAAGACCATCACTCTCGAGGTCGAGAGCAGCGAC 31307
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| ||||||||| ||||| |||||||| |||||
Sbjct 31306 ACCATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAAGG 31266
>seq132
Length=289350
Score = 87.8 bits (96), Expect = 4e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081
||| ||||||||||||||||| || || ||||||||||| || |||||||| ||||| |
Sbjct 148510 AGGGATCCCTCCGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCG 148569
Query 178082 GACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||| |||| || || || || || || || ||
Sbjct 148570 CACCCTGGCTGACTACAACATCCAGAAGGAGTCCACGCTTCACCTGGT 148617
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || ||||| || || ||||||||||| ||||| || ||| ||
Sbjct 148281 CAGATCTTTGTGAAGACGCTCACCGGGAAGACGATCACCCTGGAGGTCGAGAGCAGCGAT 148340
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| |||||||| ||||| |||||||| |||||
Sbjct 148341 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGG 148381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203554948173032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |