Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1199 84.2 5e-11 >seq1199 Length=7341449 Score = 84.2 bits (92), Expect = 5e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| |||| |||||||| || ||| ||| ||||| || ||| || Sbjct 5064877 GACTTTGACTATGATTATTTTGGGTTCAAAACTCTCGAGCGATCTTATCTTCTAAAAGTT 5064818 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || ||| | || || | ||| || ||||||||| |||| ||||| || |||||| Sbjct 5064817 CAAGGAAAGGTTGTTGAGAGGCCTCAACATATGTTGATGAGAGTAGCTGTTGGCATTCAC 5064758 Query 248929 AAGGATGACATAGA 248942 ||||| ||||| || Sbjct 5064757 AAGGAAGACATTGA 5064744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073687348646528