Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq461 116 3e-21 >seq461 Length=5900637 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| |||||| |||||||||||||| || ||| | || || Sbjct 2469844 ACCAAGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGCGAGAGTACGACCATCCTCT 2469785 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || || ||||| || | || ||||||||||||||| | || ||||||||| Sbjct 2469784 AATTGCTTACCAGCGAAGATGAGCCTCTGTTGGTCGGGAGGGATCCCTTCCTTGTCCTGG 2469725 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | | ||| | ||| ||||||| |||||| ||||| Sbjct 2469724 ATCTTTGCCTTGACATTATCAATGGTATCCGAGCTCTCAACCTCCAGGGTAATGGTCTTT 2469665 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || |||||||| ||||| Sbjct 2469664 CCAGTCAGGGTTTTAACAAAGATCTGCAT 2469636 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| |||||||||||| || |||||| || || | || ||| Sbjct 2469616 ACCAGATGGAGTGTGGACTCCTTCTGAATATTATAGTCGGCGAGGGTACGGCCATCTTCC 2469557 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || ||||| || ||||||| || ||||| || || | |||||||||||| Sbjct 2469556 AATTGCTTACCGGCAAAAATCAACCTTTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTGG 2469497 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | |||| || ||| ||||||| || || || || Sbjct 2469496 ATCTTGGCCTTAACATTATCAATAGTGTCTGAACTCTCAACCTCCAAAGTGATGGTTTTA 2469437 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCTC 45344 || || || ||||||||||| ||||||||| ||||| Sbjct 2469436 CCAGTGAGGGTCTTCACAAAAATTTGCATGCCGCCTC 2469400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395047533130666