Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq922 210 3e-49 >seq922 Length=8123900 Score = 210 bits (232), Expect = 3e-49 Identities = 590/903 (65%), Gaps = 2/903 (0%) Strand=Plus/Minus Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728 ||||||||||| || || | || || || |||||||| || || | || ||| || | Sbjct 2994330 TTTTGGTATTCTCCAACCCTCTTCTCAAAGAAATTAGTCTTCCCCTGCAGTGAAATGAGT 2994271 Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 49788 ||||| ||||||| || || ||| ||| ||||| | | | ||||| || | | Sbjct 2994270 TCCATCCAATCAAATGGGTTTTGAACCCCATAGATTTTATCACACCCCAAAGCATTCAAC 2994211 Query 49789 AATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 49848 | ||||| || |||||||| || || |||||| | | |||||||| | || Sbjct 2994210 AGCCTATCAGCCACAAATTCGATGTACTGGCTCATCAGATTGCCGTTCATTCCCACTAGA 2994151 Query 49849 TTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATA 49908 | || | || || || ||||||| || || ||| | || ||| ||| Sbjct 2994150 GCACAGGGCAAGGCATCACAAACAAATTCTCTCTCTATCTCTACAGATTCCCTTACTATA 2994091 Query 49909 GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 | |||| ||| || | | || || | | | | | | | || || ||| Sbjct 2994090 TTTTGAACGCTTTGTTGAGGGAGCTTGTGGTTTAGAAGATCATAGAGAAGGCAAGCAAAA 2994031 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || ||||| | ||| || ||||| ||| ||||| || || || || | || |||||| Sbjct 2994030 TCACAGTGTAAACCTTCATCTCTTGAAATGAGTTCATTAGAGAAGGTTAAACCAGGCATT 2993971 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 | || | ||||| |||||||||||||| ||| |||||||||||||| ||||| Sbjct 2993970 AAACCCCTTTTTTTTAGCCAAAATATGGAACAAAAACTACCAGAAAAGAAGATACCTTCA 2993911 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGA 50148 || |||||| |||| | |||||| || || | | || ||||| ||| | Sbjct 2993910 ACACAGGCAAAAGCAATCAACCTCTCTGCAAAAGATTCAGAGGAATTGATCCATTTTAGC 2993851 Query 50149 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG-tt 50207 ||||| || || || || ||||| || | |||||| | || | || | || | | Sbjct 2993850 GCCCAGTCTGCTTTTTTGGCAACACAGGGAACCGTTTCAACAGCCCTGAACA-ATCGACT 2993792 Query 50208 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 50267 || ||| | ||| || | |||| || | ||| || || ||||| || || || || Sbjct 2993791 CTTCTCACTGGAATCCTTGATGTAAGATTCAAGCAAGAGGCTGTACATCTCAGAGTGGAT 2993732 Query 50268 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 50327 |||||||||||| ||||| || || |||||| |||||||| | || || || || | Sbjct 2993731 GTTTTCAATGGCGATCTGGAAGCCATAGAAAGCCCTAGCCTCTGCAACTTGAACCTCCTT 2993672 Query 50328 ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 50387 ||||| | || | |||||| ||||| || ||| |||||||| || || | Sbjct 2993671 CATGAATCGACCCGCAAGGTTTTCAAGGACTATACCATCAGAAGCTGCAAAGAAAGCAAG 2993612 Query 50388 TACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTT 50447 ||||| |||| || |||||||| | || || || ||| | | | |||| Sbjct 2993611 GACATGGGTTATGAAGTGTTTTTCCCCAGAAGTGAGAGAATCCCAGTGCTGAAGGTCTTG 2993552 Query 50448 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 50507 ||| | ||| || ||||| | ||||| || || |||||||| || |||||||| | ||| Sbjct 2993551 AGAGAGATCGACCTCTTCAGCAGTCCAGAAAGAGGCCTCTGCTTTCTTATACATCTCCCA 2993492 Query 50508 GATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATCGG 50567 || | |||||| || || || || ||||| || || || | ||||| | || Sbjct 2993491 AATTTGGGGATATTTTATGGGAAACATGCAAAATCGATCAGGGTTCGAAGCAAGAAGGGG 2993432 Query 50568 TTC 50570 ||| Sbjct 2993431 TTC 2993429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718217210343440