Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq461 98.7 7e-16 >seq461 Length=5900637 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 43912 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTC 43971 ||||| ||| || ||| ||| || ||||||||||| ||| | ||| |||| || Sbjct 2469617 CACCAGATGGAGTGTGGACTCCTTCTGAATATTATAGTCGGCGAGGGTACGGCCATCTTC 2469558 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 |||||| || || ||||| ||||||| ||||||||| | || | || || || || Sbjct 2469557 CAATTGCTTACCGGCAAAAATCAACCTTTGCTGGTCAGGGGGGATTCCCTCCTTGTCCTG 2469498 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 || || || || || ||| ||| |||| ||| || || | || || ||||| Sbjct 2469497 GATCTTGGCCTTAACATTATCAATAGTGTCTGAACTCTCAACCTCCAAAGTGATGGTTTT 2469438 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATGTCG 44125 ||| || | ||||||||||| ||||||||| || Sbjct 2469437 ACCAGTGAGGGTCTTCACAAAAATTTGCATGCCG 2469404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354752755146408