Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq461 87.8 2e-12 >seq461 Length=5900637 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCG-CTCGTCCTCCAGCT 48581 |||||| ||| |||||| || || ||||||||||| || ||| | | || || |||| Sbjct 2470295 ATGAAGGGTGGACTCCTTCTGGATATTGTAATCAGC-AAGGGTCCTCCCATCTTCAAGCT 2470237 Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641 |||| || | | || | | |||||| || || | | ||||||||| ||||| Sbjct 2470236 GCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATTT 2470177 Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701 || ||||| | | |||||||||| |||| ||| | || ||||| || || | Sbjct 2470176 TCGCCTTGACATTGTCAATGGTATCGGAGCTCTCCACCTCAAGGGTAATGGTCTTTCCAG 2470117 Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| || |||||||||||||| Sbjct 2470116 TAAGAGTCTTAACAAAAATCTGCAT 2470092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421221700041746