Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq21 89.7 4e-13 >seq21 Length=3941259 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| ||||| || |||| ||||| ||||||||| |||| ||| | Sbjct 1372216 ATGCAAATTTTCGTCAAGACCTTGACTGGCAAGACCATTACCCTGGAGGTTGAAAGCTCA 1372275 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | | || || |||||| ||||| || || ||||| || || Sbjct 1372276 GATACAATTGACAACGTGAAGGCTAAAATTCAAGACAAGGAGGGTATTCCCCCTGACCAG 1372335 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 |||||||| |||| ||| || ||||| | || ||| | || | || || |||||| Sbjct 1372336 CAAAGGCTAATTTTTGCTGGTAAACAGCTTGAGGATGGAAGGACCCTTGCTGACTATAAT 1372395 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || || ||||| ||||| || || || || Sbjct 1372396 ATCCAGAAAGAGTCTACTCTTCACTTGGT 1372424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423010374773200