Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2758 138 1e-27 >seq2758 Length=2366178 Score = 138 bits (152), Expect = 1e-27 Identities = 202/284 (71%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 10789 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 10848 |||||| || ||||| || || ||||| |||||| |||||| ||||| || || || Sbjct 1358545 ATCAAACCGCCCTGGACGAAGCAGGGCAGAGTCAAGAATATCAGCACGGTTAGTTGCAGC 1358486 Query 10849 GATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGAT 10908 || |||| ||| ||||| | | || || |||||||| ||||||||||| ||||||| Sbjct 1358485 TATCACAATGATACCCGTGTTGCCTTCGAAACCATCCATTTCAGTCAAGAGCTGATTGAG 1358426 Query 10909 GGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGCTTACCGACG 10966 ||||| || | ||||||||| | | | | | ||||| | | |||| |||| || Sbjct 1358425 TGTTTGCTCCCTCTCATCATTCCC--ACCTCCAATTCCCGCCCCCCTTTGCCTACCAACT 1358368 Query 10967 GCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTTCAAAGATA 11026 || ||||| ||||| | || ||||| || || |||||| || | |||| Sbjct 1358367 GCATCAATCTCATCAACAAACACGATGCAAGGAGCATTTTCCTTTGCTTTCTTGAAGAGG 1358308 Query 11027 TCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070 || ||||| || ||||| |||||||||||||| || ||||| Sbjct 1358307 TCACGGACCCTAGAAGCACCCACACCCACAAACATCTCAACAAA 1358264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597310695077680