Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5085 95.1 6e-15 >seq5085 Length=15980527 Score = 95.1 bits (104), Expect = 6e-15 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123 ||||||||||||| || || |||||||| || ||||||||||| |||||||| || || Sbjct 1680995 TACCTTTTCTTTTCCCACCCCCTTGATCAACATATCTTGCAGTATCATTGAAGACACGCA 1681054 Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183 |||||| | || ||| |||| || ||||| | | | || | |||||| |||| Sbjct 1681055 GCATTGGGATTATGCCATTTGAGGCACCATTTGTACCACGTATATAACTTCCTGTTGATC 1681114 Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTG 26243 | |||| || || || || || || ||||| |||| ||| ||||||| || Sbjct 1681115 TGATATTATGGACAGAAAGGCCAATACCTCCAGCTGATTTGCTAATGACTGCACACTCCT 1681174 Query 26244 AAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 | ||||| | | || || | || | ||| ||||||| Sbjct 1681175 TCAGTGTATTGTATATACCCTCAATACCATCCTCTTTCAT 1681214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253022279766950