Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1199 95.1 1e-14 >seq1199 Length=7341449 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAAT 131969 || ||||| ||| | | |||||||| || || ||||| || ||| | ||| || || Sbjct 1127655 CAGAACCAGATGAAGAGTCGACTCTTTCTGGATATTGTAATCCGCT-AGGGTTCGGCCAT 1127713 Query 131970 CTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT 132029 |||||||||| ||||| | |||| || || ||||||||||| |||||||| ||||| | Sbjct 1127714 CTTCGAGCTGCTTACCTGCGAAGATGAGGCGTTGTTGATCTGGTGGTATGCCCTCTTTGT 1127773 Query 132030 CGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCG 132089 | ||||| || | | || | ||||||| ||| || || | || | | Sbjct 1127774 CCTGGATTTTGGCCTTGACATTGTCGATCGTATCGGAGCTCTCGACCTCAAGAGTAATGG 1127833 Query 132090 TTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 | || ||||| || ||||||| ||| |||||||| Sbjct 1127834 TCTTGCCAGTTAGGGTTTTTACGAAGATCTGCAT 1127867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476576967400560