Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq2941 91.5 2e-13 seq453 91.5 2e-13 seq31 91.5 2e-13 seq2469 89.7 6e-13 seq1750 87.8 2e-12 >seq2941 Length=3069342 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 2692855 TGCTTTCATTGAGGTTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 2692796 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 2692795 TGAGCTATGAAAGCA 2692781 >seq453 Length=4878105 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 3839274 TGCTTTCATTGAGATTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 3839215 Query 79684 TGAGCTACGAAAGCA 79698 ||||||| ||||||| Sbjct 3839214 TGAGCTATGAAAGCA 3839200 >seq31 Length=4238611 Score = 91.5 bits (100), Expect = 2e-13 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 79622 GACTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACC 79680 || ||||||| |||| ||||| |||| ||||||||||||||||||||||||||| ||| Sbjct 2106970 GATTGCTTTCATTGAGATTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACC 2106911 Query 79681 AATTGAGCTACGAAAGCAAA 79700 || ||||||| |||||| || Sbjct 2106910 AACTGAGCTATGAAAGCGAA 2106891 >seq2469 Length=3070426 Score = 89.7 bits (98), Expect = 6e-13 Identities = 65/74 (88%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 79626 GCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAATT 79684 |||||| |||| ||||| |||| ||||||||||||||||||||||||||| ||||| | Sbjct 1133081 GCTTTCATTGAGATTTGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAACT 1133140 Query 79685 GAGCTACGAAAGCA 79698 |||||| ||||||| Sbjct 1133141 GAGCTATGAAAGCA 1133154 >seq1750 Length=7204098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 79610 TACTTAGGTCCAGAC-TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAAC 79668 ||| |||| ||| | ||||||| |||| || || |||| |||||||||||||||||| Sbjct 4664211 TACGTAGGGCCAATCATGCTTTCATTGAGATTCGAACTCAAGACCTCCCGCTTACTAAAC 4664270 Query 79669 GGGTGCTCT-ACCAATTGAGCTACGAAAGC 79697 ||||||||| ||||| ||||||| |||||| Sbjct 4664271 GGGTGCTCTAACCAACTGAGCTATGAAAGC 4664300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547176696210800