Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amborella_20trichopoda_20[refseq_20GCF_5F000471905.2_202013-09-30] 5,746 sequences; 706,495,326 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq21 93.3 4e-14 >seq21 Length=3941259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| ||||| || ||||| ||||| ||||||||| |||| ||| | Sbjct 1372216 ATGCAAATTTTCGTCAAGACCTTGACTGGCAAGACCATTACCCTGGAGGTTGAAAGCTCA 1372275 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | | || || |||||| ||||| || || ||||| || || Sbjct 1372276 GATACAATTGACAACGTGAAGGCTAAAATTCAAGACAAGGAGGGTATTCCCCCTGACCAG 1372335 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 |||||||| |||| ||| || ||||| | || ||| | || | || || |||||| Sbjct 1372336 CAAAGGCTAATTTTTGCTGGTAAACAGCTTGAGGATGGAAGGACCCTTGCTGACTATAAT 1372395 Query 111280 ATACAAAAAGAATCTACACTACATTTAGT 111308 || || ||||| ||||| || || || || Sbjct 1372396 ATCCAGAAAGAGTCTACTCTTCACTTGGT 1372424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421781660825296