Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1245 82.4 8e-11 >seq1245 Length=60194 Score = 82.4 bits (90), Expect = 8e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 |||||||||||| || || || || || | |||||| || || |||| |||| | Sbjct 44541 CACGCGAAGTCGGTGTGCAGCCCCTCATCGCGGCTGATGAGCTCATTGGCAAAACAAAGG 44600 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCCGAAAAGAA 16320 || ||||| ||| || ||||| | |||||| || || ||| ||||||||||| ||| Sbjct 44601 CCGGGCATGAGTCCCCGCTTCTTCAGCCAGAAGATGGC-GCAGAATGACCCCGAGAAGTG 44659 Query 16321 TATACCCTCAACAGATGCAAAAGC 16344 |||||||| || ||||||| || Sbjct 44660 GATACCCTCCACGCATGCAAAGGC 44683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511402803678480