Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1324 113 1e-19 >seq1324 Length=68835 Score = 113 bits (124), Expect = 1e-19 Identities = 122/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 248782 CTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACG 248841 |||||| ||| || ||||| | || || |||||||| | ||| | |||||| || Sbjct 22287 CTGGACAGCGTCATCATCTACGACCGCGACTTTGAGTACGACTACTTCGGTTTCAAGACT 22228 Query 248842 CTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATG 248901 |||||| ||||| || |||||| | |||||||| | || || ||| ||||||||| Sbjct 22227 CTGGAGCGCTCGTACCTGCTCAAAGTGAATGGCAAGGTTGTAGAGCGACCGCAGCACATG 22168 Query 248902 TTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAG 248943 | ||||| ||||||||||| ||||||||| | ||||| ||| Sbjct 22167 CTCATGCGTGTGGCTGTCGGCATTCACAAGCAGGACATTGAG 22126 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 249275 CGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAA 249334 |||| ||||| ||| ||||| |||||| || || || || |||| || |||||| | Sbjct 21288 CGTTTGCCATTTATCTGGAACCGTGGCATGCGGACATCTTTGAGTGGCTAGACTTGCGCA 21229 Query 249335 AGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCG 249394 ||||| ||||||| ||| || ||||||| ||||| ||||||||||| ||||| || Sbjct 21228 AGAACCACGGCAAGGAGGAGGTGCGAGCGCGCGACCTGTTCTACGGCCTCTGGGTGAACG 21169 Query 249395 ACTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGG 249432 || |||||||| ||||| ||| ||||| | ||| Sbjct 21168 ACCTGTTCATGAAGCGCGTGGAGGAGAACGGCAAGTGG 21131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073741443655552