Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1776 93.3 4e-14 >seq1776 Length=305386 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 24828 CATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATC 24887 |||||||||||| ||||| || ||| | |||||||| || || ||| | || || || || Sbjct 213861 CATCATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTC 213920 Query 24888 GAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGA 24947 |||||||| | || | || |||| || ||| | ||||| || | || ||| Sbjct 213921 GAGCGACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAAGAGGGAATTCCCCCTGA 213980 Query 24948 CCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTA 25007 |||||| | | || | || ||||| || ||||| ||| || ||| | ||||| Sbjct 213981 CCAGCAGAGGCTTATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCGGATTA 214040 Query 25008 CAGCATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 || || ||||| ||| |||| ||||| || ||| Sbjct 214041 CAATATCCAGAAGGAGTCCACTCTTCACTTGGTG 214074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418294752082880