Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1245 104 3e-17 >seq1245 Length=60194 Score = 104 bits (114), Expect = 3e-17 Identities = 286/434 (66%), Gaps = 6/434 (1%) Strand=Plus/Plus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || ||||| ||| ||| || ||||| || | || || | || |||| ||| || Sbjct 44541 CACGCGAAGTCGGTGTGCAGCCCCTCATCGCGGCTGATGAGCTCATTGGCAAAACAAAGG 44600 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAAGAA 36276 |||||||| || || ||||| || ||||| || |||| |||| ||||| || || ||| Sbjct 44601 CCGGGCATGAGTCCCCGCTTCTTCAGCCAGAAGATGG-CGCAGAATGACCCCGAGAAGTG 44659 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCACTGTCATGT 36334 || || || || |||||||||| || ||||||||| | |||| | | | Sbjct 44660 GATACCCTCCACGCATGCAAAGGCAACGAGCCTCTCTCCAAACGACCGTCCGCGC--TCG 44717 Query 36335 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 36394 |||||||| ||||| || |||||| | | ||||| || |||| || || || Sbjct 44718 ATCCACTTGGTTGCCCAGTCCGCCTTCCTCTGGACACATGGGATTGAGTCGATGGCGCCG 44777 Query 36395 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 36454 || | | || || || | | || || || || | |||||| | || |||||| Sbjct 44778 AACATCTCGTCCTTCTCCTGAGAGTCCTTCACGTAGGCATCAATGAGGAGGCTATACTGC 44837 Query 36455 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 36514 || || || ||| | ||||| ||||| || | |||||| | || || | |||| Sbjct 44838 TCAGAGTGGATGGTCTCAATCGCCATCTGCATGGAGTAGAATGCCCGTGCTTCTGGAATC 44897 Query 36515 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 36574 || || |||| | | || | || | ||||| || || ||||||||||| || Sbjct 44898 TGCACCTCTGCAAAGAACCTGAGGGCCAGGTTTTCCAGGACAATCCCGTCACTGGCAGCG 44957 Query 36575 AAAAACGCCAATAC 36588 || || ||||| || Sbjct 44958 AAGAAGGCCAACAC 44971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658157875931760