Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1324 91.5 2e-13 >seq1324 Length=68835 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 97248 AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAA 97307 || ||||| |||||||| | || |||||||||||||| ||||||| |||||||| || Sbjct 20559 AACCGCAAGAGCAACCAGCAGAACCTGGGCACCATCAAGTGCTCCAACCTGTGCACCGAG 20500 Query 97308 ATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGGCATC 97357 || ||||||||| || || || |||||||| || ||| ||||| || Sbjct 20499 ATCGTAGAGTACACCAGCCCTGAGGAGACGGCTGTCTGCAACCTGGCCTC 20450 Score = 87.8 bits (96), Expect = 3e-12 Identities = 171/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 96894 CCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTATCGAG 96953 ||||| || | ||| | || ||||||| ||||| |||||| | ||||| | | || Sbjct 21295 CCAGGTGCGTTTGCCATTTATCTGGAACCGTGGCATGCGGACATCTTTGAGTGGCTAGAC 21236 Query 96954 ATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACTCTGG 97013 ||||||| ||| ||| || |||| ||||| | ||| |||| || | |||||| Sbjct 21235 TTGCGCAAGAACCACGGCAAGGAGGAGGTGCGAGCGCGCGACCTGTTCTACGGCCTCTGG 21176 Query 97014 GTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCC 97073 ||| || |||||||||||||||| | || ||| | ||| ||| | |||||| Sbjct 21175 GTGAACGACCTGTTCATGAAGCGCGTGGAGGAGAACGGCAAGTGGTCCCTCTTCTGCCCC 21116 Query 97074 GACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCC 97133 || | ||| || ||| | || ||||| || ||||||||| ||||| | Sbjct 21115 AACGAGGCACAGGGCCTGGCGGAGGTGTGGGGGGACAAGTTTGAGGAGCTGTACATCAGC 21056 Query 97134 TACGAGCAAGAGG 97146 |||||| | |||| Sbjct 21055 TACGAGAAGGAGG 21043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741042396482640