Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1573 107 3e-19 seq1419 105 1e-18 >seq1573 Length=130685 Score = 107 bits (118), Expect = 3e-19 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||| | ||||||||||| || ||||||||||| || ||| | |||||||| | | ||| Sbjct 106777 CTTAGGGATAACATCCAGGGCATCACCAAGCCCGCCATCAGGCGTCTGGCAAGAAGGGGT 106836 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||||||||| || ||| | ||||||| |||| || | ||| | ||| ||||| Sbjct 106837 GGAGTCAAGCGCATCAGTGGCCTCATCTATGAGGAGACCCGCGGTGTCCTCAAGGTCTTC 106896 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || ||| ||| || | |||||| || ||| || ||||| || || |||||||| Sbjct 106897 CTGGAGAACGTCATTCGTGATGCGGTCACCTACACGGAGCATGCCCGCCGCAAGACTGTG 106956 Query 16634 AC 16635 || Sbjct 106957 AC 106958 >seq1419 Length=88342 Score = 105 bits (116), Expect = 1e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| ||| | ||||||||||| || ||||||||||| || ||| Sbjct 22526 GCCAAGCGCCACCGCAAGGTTCTCAGGGATAACATCCAGGGCATCACCAAGCCCGCCATC 22467 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 | |||||||| | | |||||||||||||| || || | ||||||| |||| Sbjct 22466 AGGCGTCTGGCAAGAAGGGGTGGAGTCAAGCGCATCAGCGGTCTCATCTATGAGGAGACC 22407 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || | ||| | ||||| ||| ||| |||| |||||| || ||| || ||| Sbjct 22406 CGCGGCGTCCTCAAGGTTTTCCTGGAGAACGTCATCCGTGATGCGGTCACCTACACGGAG 22347 Query 16613 CACGCTAAACGTAAGACTGTCAC 16635 || ||| || ||||| ||||| Sbjct 22346 CATGCTCGCCGCAAGACAGTCAC 22324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073541447102