Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq1813 343 4e-90 >seq1813 Length=181482 Score = 343 bits (380), Expect = 4e-90 Identities = 466/647 (72%), Gaps = 2/647 (0%) Strand=Plus/Plus Query 19630 AGTGGGAACT-ATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCA 19688 ||||||| || | ||| | | || || ||| | || ||||| ||||| || | || Sbjct 72450 AGTGGGAGCTTAGCTTCC-GTTTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCT 72508 Query 19689 CCACTATCAGCAGCTCTTGCTGTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGT 19748 || | |||| ||| || ||||| | | ||||| |||| ||||| || || | Sbjct 72509 CCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCT 72568 Query 19749 GATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAA 19808 ||||||||||||||||| || || || ||||| ||||||||| | || |||||||| || Sbjct 72569 GATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAG 72628 Query 19809 CACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCT 19868 ||||| || |||||||| || ||||||||||| ||||| |||||||| || || || ||| Sbjct 72629 CACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCT 72688 Query 19869 CTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAG 19928 || || ||||||||| || |||||||||||| | ||| || || ||||| Sbjct 72689 CTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAA 72748 Query 19929 GATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTC 19988 | | || ||| ||| || ||||| || ||||| | || || || || || || Sbjct 72749 AACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTG 72808 Query 19989 GCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGT 20048 ||||| ||||| |||||||| | | || || ||||| ||| ||||| || |||||| Sbjct 72809 GCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGT 72868 Query 20049 TCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGA 20108 ||||| || ||||| || ||| ||| || || || ||||| ||| |||| | | || Sbjct 72869 TCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGT 72928 Query 20109 ATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTC 20168 ||| |||||||||| ||||||||||| ||||| ||||| ||||| || || ||||| | Sbjct 72929 ATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGC 72988 Query 20169 AACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAA 20228 | || | ||| || |||||||| | | || | || ||||| || | ||| Sbjct 72989 CAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAA 73048 Query 20229 GTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCTTC 20275 || ||||||||||| || ||||| |||||||| ||||| ||||||| Sbjct 73049 GTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCTTC 73095 Score = 152 bits (168), Expect = 1e-32 Identities = 208/288 (72%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || || || ||||| || || || || ||||||||||| | ||||||||||| || || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 19350 ATGATTCCTTGCTTACTAGCTGCTAC-TACTTGCTTTATACTCGCCTTTATCGCAGCACC 19408 ||||| ||| | || | |||| || | | || ||||| | ||||| ||||| || || Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTG-TTTATTATTGCCTTCATCGCTGCTCC 44366 Query 19409 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 19468 ||||| || || ||||| || |||||||| ||||| || || || |||| || ||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 19469 TATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGAT 19528 || || ||||| || | | || | ||| ||| || || || ||||| || || || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 19529 CTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATA 19576 |||||| || | | | ||||| ||| | ||||||||||| || || Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTA 44198 Score = 152 bits (168), Expect = 1e-32 Identities = 208/288 (72%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || || || ||||| || || || || ||||||||||| | ||||||||||| || || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 19350 ATGATTCCTTGCTTACTAGCTGCTA-CTACTTGCTTTATACTCGCCTTTATCGCAGCACC 19408 ||||| ||| | || | |||| | || | || ||||| | ||||| ||||| || || Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACCTCCGTG-TTTATTATTGCCTTCATCGCTGCTCC 134992 Query 19409 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 19468 ||||| || || ||||| || |||||||| ||||| || || || |||| || ||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 19469 TATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGAT 19528 || || ||||| || | | || | ||| ||| || || || ||||| || || || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 19529 CTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATA 19576 |||||| || | | | ||||| ||| | ||||||||||| || || Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTA 135160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144438488547384