Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1541 91.5 1e-13 seq1776 86.0 5e-12 >seq1541 Length=115782 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| | || || ||| | | | Sbjct 45217 ATGCAGATCTTTGTGAAGACCCTGACCGGGAAGACCATCACCCTGGAGGTGGAGTCAAGC 45158 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| ||||| || ||||| || || Sbjct 45157 GACACCATCGACAACGTAAAGGCCAAGATTCAGGACAAGGAAGGAATCCCTCCTGACCAG 45098 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || |||||||| || || |||| ||||| | | || |||||| Sbjct 45097 CAGAGGCTCATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGAACCCTGGCTGACTATAAC 45038 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || || || || |||| || ||| Sbjct 45037 ATCCAGAAGGAGTCCACTCTTCACTTGGTG 45008 >seq1776 Length=305386 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || || | || ||| | || || ||| | | | Sbjct 213865 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 213924 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| |||||||| || || || || || || Sbjct 213925 GACACCATCGACAACGTGAAGGCCAAGATTCAGGACAAAGAGGGAATTCCCCCTGACCAG 213984 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | || |||||||| || || |||| ||| | | | ||||| || Sbjct 213985 CAGAGGCTTATCTTCGCTGGCAAGCAGCTGGAGGATGGCAGGACCCTTGCGGATTACAAT 214044 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || || || || |||| || ||| | || |||| ||||| Sbjct 214045 ATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCAGGCTGAGGGGAGG 214091 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || ||||| | ||||| || | || || | || |||||| ||| | Sbjct 216238 ATGCAAATCTTCGTCAAAACCCTCACTGGCAAGACCATCACGCTTGAGGTCGAGTCCAGC 216297 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| || || || ||||| || || || || Sbjct 216298 GACACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGCATTCCCCCAGACCAG 216357 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||| | || ||| ||||| | || |||| | | | | ||| || ||| Sbjct 216358 CAGAGGTTGATCTTCGCCGGGAAGCAGTTGGAGGATGGCCGCACTCTGGCCGACTACAAC 216417 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || || || | || || ||| | || |||| || || Sbjct 216418 ATTCAGAAGGAGTCGACCCTGCACTTGGTGCTCAGGCTGAGGGGTGG 216464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926494921170