Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1263 114 2e-20 >seq1263 Length=58702 Score = 114 bits (126), Expect = 2e-20 Identities = 178/248 (72%), Gaps = 16/248 (6%) Strand=Plus/Minus Query 137871 CGACATGATGCACTTGCTGGCGC-AGC-TCAGCTCTTTCAGCTCGGCAATGGCCTCGTAC 137928 ||||| |||||||||| ||| | | | | ||||| | | |||||| ||| ||| | Sbjct 10025 CGACACGATGCACTTG--GGCACCATCATGAGCTCCTGGATCTCGGCCTTGGTCTCCGTC 9968 Query 137929 GACTGCGGCACGTGAATGTTCATCTCGTCGCCGTCAAAGTCGCAGTTGAAGGGCTTCGTT 137988 | ||| |||||||| ||||||||||||||||||||||||||| |||| ||||| | || Sbjct 9967 GTCTGGGGCACGTGCATGTTCATCTCGTCGCCGTCAAAGTCGGCGTTGTAGGGCGTGGTG 9908 Query 137989 ATGGCCAGGTTGATTTTGAGCGTCTTGACTGGTTTGATGACCACCTTAA------AGGCC 138042 | || ||||||| || | | || | | || ||| | ||| | | || Sbjct 9907 ACGGAGAGGTTGAGGCGGAAGG--TGGAGTAG-TTCATG---ATCTTGATGCGGTGGCCC 9854 Query 138043 ATCATGGACGCCTTGTGCAGCGTCGGTTGCCGGTTGAGCAGCACGTAGTCGCCGTCCATC 138102 || |||||| |||||| |||| ||| |||||||||| |||||| ||||||||| | Sbjct 9853 ATGATGGACATCTTGTGAAGCGACGGCTGCCGGTTGAACAGCACCACGTCGCCGTCGCAC 9794 Query 138103 AGCTGCCG 138110 || ||||| Sbjct 9793 AGGTGCCG 9786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611378136686400