Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1075 93.3 4e-14 seq1776 89.7 4e-13 >seq1075 Length=42261 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || || ||||| || || ||||| | ||||| ||||| || ||||||||||| | Sbjct 14880 CCTCCTCGGAGTCTTAATACCAAATGGAGAGTAGACTCTTTCTGGATGTTGTAATCAGCC 14821 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || || || || || ||||| ||| ||||||| ||||| ||||| || ||| Sbjct 14820 AGCGTGCGGCCGTCCTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 14761 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT-TCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| ||| || | ||| | || |||| |||||| | || || || Sbjct 14760 ATCCCCTCCTTGTCCTGGATC-TTGGCTTTGACAGTGTCAATGGTGTCTGATGACTCCAC 14702 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | ||| | ||||| | |||| || || ||||| ||||| Sbjct 14701 TTCGAGGGTTATGGTTTTTGCTGTCAATGTACGAACGAAAATTTGCAT 14654 >seq1776 Length=305386 Score = 89.7 bits (98), Expect = 4e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 ||| || || || || |||||| |||| || | ||| ||||| || ||||| || ||||| Sbjct 214020 ATCCTCCAGCTGCTTGCCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCCTCTTT 213961 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| |||||| || | | || | ||||||| | || || || || | ||| | Sbjct 213960 GTCCTGAATCTTGGCCTTCACGTTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGAT 213901 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || ||||||||||| || || ||||| ||||||||| Sbjct 213900 AGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 213864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420125111616168