Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1245 91.5 3e-13 >seq1245 Length=60194 Score = 91.5 bits (100), Expect = 3e-13 Identities = 332/517 (64%), Gaps = 6/517 (1%) Strand=Plus/Minus Query 243203 ACGAGCTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTC 243262 ||||| | |||| ||||||||| || || || || | ||||| | ||||| Sbjct 44787 ACGAGATGTTCGGCGCCATCGACTCAATCCCATGTGTCCAGAGGAAGGCGGACTGGGCAA 44728 Query 243263 AGAAGTGGCTAGAACCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTG 243322 |||||| | || | ||| || |||| ||| | ||||| |||| | ||||| | Sbjct 44727 CCAAGTGGATCGAGCGCGGACGGTCGTTTGGAGAGAGGCTCGTTGCCTTTGCATGCGTGG 44668 Query 243323 AAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGA 243382 | ||||| | || || ||| |||||||||||||| |||||| ||| || | | Sbjct 44667 AGGGTATCCACTTCTCGGGGTCATTCTGCGCCATCTTCTGGCTGAAGAAGCGGGGACTCA 44608 Query 243383 TGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGT 243442 |||| ||||| || | | || ||| ||||||| ||||| ||||| || ||| | | Sbjct 44607 TGCCCGGCCTTTGTTTTGCCAATGAGCTCATCAGCCGCGATGAGGGGCTGCACACCGACT 44548 Query 243443 TCG-GTG--AGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATTCGAAACGGTCAAAC 243499 ||| ||| ||| | || | |||||| | ||||| ||| | || || | Sbjct 44547 TCGCGTGCCAGC---TCTACGAGACCCTCCAGGAGAAGCTGCCAGCTCAGACCGTGAGGG 44491 Query 243500 AAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCC 243559 | || |||| || || || | | || ||| || || || || || | || ||| Sbjct 44490 ACATTGTCACTGATGCTGTGAAGATTGAGCAGGCTTTTATCTGTGAGGCGCTACCCTGCA 44431 Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 | |||||||| || || || || ||| ||||||| || || || || ||| | Sbjct 44430 GTCTTATTGGAATCAATGCTTCCCTGATGTCGGAGTACATTGAGTTTGTTGCAGACAGGC 44371 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | | | ||| || || ||| | | ||| | ||| ||||| || ||||||| Sbjct 44370 TCTGCCAGCAGCTGGGGTACGAGGCAATATACGGCACCACCAACCCTTTCAGTTTTATGG 44311 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGA 243716 | || || |||| | || ||| | |||||||| || Sbjct 44310 ACCTGATCGCGCTCGATGGAAAAGCAAACTTCTTTGA 44274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102854367000900