Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1245 127 2e-24 seq1085 122 1e-22 seq992 107 2e-18 seq965 93.3 5e-14 seq493 93.3 5e-14 seq1324 84.2 3e-11 seq363 84.2 3e-11 seq1527 82.4 9e-11 >seq1245 Length=60194 Score = 127 bits (140), Expect = 2e-24 Identities = 155/210 (74%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || ||||| || ||| |||||| ||||| | || || || || |||||||| || Sbjct 44555 GTGCAGCCCCTCATCGCGGCTGATGAGCTCATTGGCAAAACAAAGGCCGGGCATGAGTCC 44614 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 ||||||||||| |||||| || || || ||||| ||||||||| ||| |||||||| || Sbjct 44615 CCGCTTCTTCAGCCAGAAGATGGCGCAGAATGACCCCGAGAAGTGGATACCCTCCACGCA 44674 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTG-TCAAACCACTTCATCG 126236 || || |||| ||| | ||| |||| || || | | | || | |||||| | | Sbjct 44675 TGCAAAGGCAACGAGCCTCTCTCCAAACGACCG----TCCGCGCTCGATCCACTTGGTTG 44730 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGA 126266 |||| | |||||| ||| || ||| |||| Sbjct 44731 CCCAGTCCGCCTTCCTCTGGACACATGGGA 44760 >seq1085 Length=40323 Score = 122 bits (134), Expect = 1e-22 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| ||| ||| || || ||||| ||| |||||| ||||| | || || || || Sbjct 2828 GCAAAGTCTGTGTGCAGCCCTTCGTCGCGGCTGATGAGCTCATTGGCAAAACAAAGGCCA 2769 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| ||||||||||||| |||||| || ||||| || || ||| ||||| ||| Sbjct 2768 GGCATGAGCCCCCGCTTCTTCAGCCAGAAGATGGCACAGAAGGACCCCAAGAAGTGGATA 2709 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGC 126211 |||||||| || || || |||| ||| | ||| |||| || ||| Sbjct 2708 CCCTCCACGCATGCAAAGGCAACGAGCCTCTCTCCAAACGACCGC 2664 >seq992 Length=32546 Score = 107 bits (118), Expect = 2e-18 Identities = 426/662 (64%), Gaps = 15/662 (2%) Strand=Plus/Plus Query 113684 AAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATC 113743 ||||||||||| ||||| |||||||||||| ||| || || ||||| | ||||| Sbjct 4330 AAGAGGTTCATGGACTGGGACTGATCGATGAAGATTCCGCGGTCTGCCGCGAGGTCAATT 4389 Query 113744 ACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATA 113803 || || | ||| || | ||| || || | || || | ||| | ||| || ||||| Sbjct 4390 ACGACCCGCTGCTTTATCTGCCATACCGTCTTATACAGCTCCTTCAGATCGTCCGGGATC 4449 Query 113804 TCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATCCTTCATATCCTTT 113860 || ||| || ||||||| |||| || |||||| | |||||||||| | Sbjct 4450 TCGGGGATGGCCTGAATGGAGC--CCCG-ATTCGCCATGATCTGGTCCTTCATATGATCA 4506 Query 113861 GACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACAAACTCA 113920 ||| || || | | | ||| ||| ||| ||| || || || | || |||||||| Sbjct 4507 TTCCACAGGCCCAGCCTGACGAGGTCCGCCATGAGGTGGTTGTTTGCCACCACAAACTCC 4566 Query 113921 CCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTA 113980 || ||||| || |||| || || | ||| | | | | ||| ||| ||| Sbjct 4567 CCTGCGAGAGTACGTCGCACGTACAGGTTGCTGCTCAACGCCTCTGCCGCCTCGACGTTC 4626 Query 113981 CCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGA 114040 || | || || |||| || || |||||||| | | || | || || || | Sbjct 4627 CCAAGGAGGTGACCGGTAGACGCGGTGGGCATCACACACGTAAGCAAACTATTGCGCATG 4686 Query 114041 CCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCT---TTGTCTCC 114097 ||| | | | | ||| ||||| ||| || |||| |||||| | || || || | Sbjct 4687 CCCGACTTCTTCACGCGCTCCTTAAGGCCGGCCCAATCGTAGCCCATCTCGGCTGGCTTC 4746 Query 114098 CCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCG 114157 || ||||| |||||||| || | || | ||| | || ||||||| || ||||| Sbjct 4747 TTCTCCCACAGGTCAAACTGCAGCAGCCCCTTGGACGAGGGAGATCCCTGGAAGGTCTCA 4806 Query 114158 TATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTC 114217 || | ||||| |||| || | ||| | |||||||| || |||| || || || Sbjct 4807 TACGCGCCCTTCTCCTCAGCGAGCTCGACGGACGCCTCGACCGCCGCGTAGTAGATGCTC 4866 Query 114218 TCAAAAATGCGAGC-ATTCATTGCCTTGGCCTCGTCGGAAT--CAAACGCGAGTCGGCAC 114274 | || ||| | || || | ||| ||||| | ||| | || | || ||| | Sbjct 4867 TGGAAGATG-GCGCTGTTGAGCGCCCTGGCCCC--CGGGCTGCTGAAGGGCAGCCGGAGC 4923 Query 114275 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 114334 | || || || ||||| || || || || |||||||| | || || || | |||||| Sbjct 4924 ATCATGAAGACGTCCGCCAGCCCCTGCACGCCGAGGCCCAGGGGACGGTGGCGCATATTC 4983 Query 114335 GA 114336 || Sbjct 4984 GA 4985 >seq965 Length=28847 Score = 93.3 bits (102), Expect = 5e-14 Identities = 274/419 (65%), Gaps = 5/419 (1%) Strand=Plus/Plus Query 114528 CCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTAC 114587 ||| ||| | ||||| |||||||| ||||||| || || || |||||| |||| Sbjct 1274 CCGCACAGAGGTTTGAGCTCTTAATAGTGCCCAGGTGGCGCTGGTTGGACTTTCTGTTGA 1333 Query 114588 ACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCT 114647 || |||||| | || | ||| || ||||| |||| || | | | || || || Sbjct 1334 CGGCGTCCTTGAAGAGGACGTACGGGGTCCCTCCCTCCACCTGCGCCGTCAGCATGGCGC 1393 Query 114648 TCCAGACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCT---CCTCGTACTTTG 114704 |||||||| | ||| |||| | |||| ||||| |||| || | Sbjct 1394 TCCAGACAGCCTTGGCCCGCACCACCCTGCTGGCGAGCCCCGGGGTTGCCTCATAAGAGG 1453 Query 114705 TGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGC 114764 ||| | |||||||| | | || | || | ||| || || ||||| | ||| Sbjct 1454 CGTACAACTTTTCAAACTGTGCTCCATAGCAGTCGGGGAGGCCGGGGGCCTTGTTGGGGT 1513 Query 114765 AGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGA 114824 ||| || ||||| || ||||||| || ||||| ||||| || || || | ||||| Sbjct 1514 CGAACAGGGACCACATGCCGTCCTCCTCCACCCGCTTGATGAACAGATCCGGCACCCAGA 1573 Query 114825 GAGCTGAGAAGAGATCCCGACAGCG-AGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 | || | |||||| || | || | | || || | || ||| | | |||| ||| Sbjct 1574 GGGCGGTGAAGAGGTCTCTGCACCTCATCTCCTCTTTGCCGCTGTTCTTG-CGCAGCTCG 1632 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 114942 | ||||| | |||||| ||||||||||| |||||||| | | ||| || ||||| || Sbjct 1633 AGGAAGTCGAAGATATCAGCGTGCCACGGCTCCAGGTAGATTGTGATGGAGCCCTTCCG 1691 >seq493 Length=7941 Score = 93.3 bits (102), Expect = 5e-14 Identities = 171/245 (70%), Gaps = 8/245 (3%) Strand=Plus/Minus Query 113612 CCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAA-CTTGGAGAGTGT 113670 || |||||||| ||| |||| | | || | || |||||| | |||| || | || Sbjct 334 CCTGTCTTGAGGCCCAGCTTGTGGCCGTAGACTAGCGCCGAGGAGAGGCTTGCAG-GCGT 276 Query 113671 TGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGC 113730 || | ||||||| | |||| || ||||| |||||||||||| || ||||| || Sbjct 275 CGGCTTGGCCATGAACAAATTCAAGCTCTGGGACTGATCGATGAAGATCCCGCGATCGGC 216 Query 113731 CGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAAT 113790 || | ||| ||||| ||||| |||||| |||||||| || | ||| || | ||| | Sbjct 215 TGCGAAATCGATCACGACCTTCTGCTTGATCTCCCACACCGTGCGGTACAGCTCCTTGAG 156 Query 113791 ATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGA---GATC 113847 || || ||||| || |||| |||||||| | |||| ||| |||||| | || Sbjct 155 GTCGTCCGGGATCTCAGGGATAGCCTGGATGGA--CCCCCG-GTTGGCCATGATCTGCTC 99 Query 113848 CTTCA 113852 ||||| Sbjct 98 CTTCA 94 >seq1324 Length=68835 Score = 84.2 bits (92), Expect = 3e-11 Identities = 187/277 (68%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 114951 CCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAG 115010 |||| | ||||| || || ||| |||| || || | |||||||| | ||| |||| | Sbjct 21559 CCTGATCAACATATCTGGCAGTGTCATTGAAGACTCTGAGCATTGGGACGATGCCATTGG 21618 Query 115011 ATTGGCCATTTGTCCCCCGAATACGAGACTTAT--TGGCTCTGACATCATGGATGTGCAT 115068 || ||| ||||| || || || || || | |||| | || | |||||| || Sbjct 21619 ATGTGCCGTTTGTGCCGCGGATGT-AG-CTGCTGGTGGCGCGGATGTTGTGGATGGACAG 21676 Query 115069 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 115128 || || || ||||| | ||| ||| ||| |||||| |||| || ||||||| || Sbjct 21677 TCCGATGCCGCCTGCGCTCTTGCTGATGCCCGCACACTCCTTGAGGGTGTCGTAGATGCC 21736 Query 115129 GTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGT 115188 ||||| ||| |||| | | ||||||||||| | || |||| || || Sbjct 21737 CTCGATGCTGTCCTCCTTCATGCACACCAGGAAGCAGCTGCTGAGCTGCGGCCGAGGGGT 21796 Query 115189 ACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 || |||||||||||||| || | |||||| || || Sbjct 21797 GCCGGCGTTGAAGAGGGTGGGGGAGGCGTGGGTGTAC 21833 Score = 82.4 bits (90), Expect = 9e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 |||||| |||||| | |||| || | ||||||| || ||| |||| | || | Sbjct 21043 CCTCCTTCTCGTAGCTGATGTACAGCTCCTCAAACTTGTCCCCCCACACCTCCGCCAGGC 21102 Query 114747 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGA 114806 | |||||| | ||||||||||| ||||| | || |||||| || |||||||||| Sbjct 21103 CCTGTGCCTCGTTGGGGCAGAAGAGGGACCACTTGCCGTTCTCCTCCACGCGCTTCATGA 21162 Query 114807 AGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCT 114866 | ||||| | |||||| | |||| || || || || | || || | || | Sbjct 21163 ACAGGTCGTTCACCCAGAGGCCGTAGAACAGGTCGCGCGCTCGCACCTCCTCCTTGCCGT 21222 Query 114867 GATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 114921 | || ||||| || | | || | ||| ||||| |||||||||||||| || Sbjct 21223 GGTTCTTGCGCAAGTCTAGCCACTCAAAGATGTCCGCATGCCACGGTTCCAGATA 21277 >seq363 Length=6568 Score = 84.2 bits (92), Expect = 3e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 113683 GAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAAT 113742 |||||| |||| || ||||| |||||||||||| || ||||| || || | ||| || Sbjct 325 GAAGAGATTCAAGCTCTGGGACTGATCGATGAAGATCCCGCGATCGGCTGCGAAATCGAT 266 Query 113743 CACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGAT 113802 ||| ||||| |||||| ||||| ||||| |||| || | ||| | || || ||||| Sbjct 265 CACGACCTTCTGCTTGATCTCCCAGACAGTCTTGTACAGCTCCTTGAGGTCGTCCGGGAT 206 Query 113803 ATCCACGATATTTTGGATGGAGCC 113826 || |||| ||||| || || Sbjct 205 CTCAGGGATAGCCTGGATCGACCC 182 >seq1527 Length=111933 Score = 82.4 bits (90), Expect = 9e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 |||||| |||||||| | ||||||||| || || ||||| || || ||||| || || Sbjct 31653 GTGGAGGCCCTCGTCCCTGGAGATGAGCTCGTTGGAGAATGTGAGCCCAGGCATAAGGCC 31712 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAA 126147 ||||||||||| |||||| || || ||||| Sbjct 31713 CCGCTTCTTCAGCCAGAAGATGGCGCAAAA 31742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340055007120