Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq778 122 1e-22 seq992 111 2e-19 seq341 105 8e-18 seq1718 98.7 1e-15 seq1618 98.7 1e-15 seq1324 95.1 1e-14 seq1765 91.5 2e-13 seq1085 91.5 2e-13 seq1245 89.7 6e-13 >seq778 Length=18768 Score = 122 bits (134), Expect = 1e-22 Identities = 184/259 (71%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 119507 ATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCC 119566 ||| ||| ||||||| || ||||||||||| || || |||||||| | | || Sbjct 14430 ATGTAGCGCTTCATCTCGCGAGATGAGCTCGTTCGAAAACGTGAGTCCAGGAAGCATGCC 14489 Query 119567 TCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACA 119626 || ||||| ||||| || ||||| ||||| || | |||||||||||||| ||||| || Sbjct 14490 CCTCTTCTTCAGCCAGAATATGGCGCAAAAGCTCGCCGAAAAGAAGATGCCTTCCACGCA 14549 Query 119627 GGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGT-CGAACCACTTGAGAGCCC 119685 ||||||||||| || ||| || ||| ||||| | | | ||| |||| || |||| Sbjct 14550 GGCGAAAGCGATCAGCCGCGTGGC-GAAGCTCGAGTCCTCTCCGATGTACTTCAGGGCCC 14608 Query 119686 AGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAGTTGCTTCTTTT 119745 | | ||||| | |||||||| || || ||| |||||||| | || ||| | Sbjct 14609 ACTGTGCCTTCTTAGCGATGCAGGGTACCGTGGAGATCGCTTCGAACAACGCCTCCTTCT 14668 Query 119746 CAGCACCATCCTTAATATA 119764 | || |||||| ||||| Sbjct 14669 CCGCGGCATCCTGGATATA 14687 >seq992 Length=32546 Score = 111 bits (122), Expect = 2e-19 Identities = 175/248 (71%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 110510 CCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCG 110569 |||||||| | ||||| |||||||| |||| ||||| || | |||||| ||| Sbjct 5617 CCTCGTACCTCTCGTACAGCTCCTCAAACTCCTCCCCGTAGCAGTCCGGGAGACCCCTCG 5676 Query 110570 CCTTGTC-GGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGG 110628 ||||||| ||| || ||||| ||||| | || | ||| || | ||| ||||||||| Sbjct 5677 CCTTGTCCGGGTCA-AAGAGAGACCACGTGCCGTCAGACTCGACGCGCTTGATGAACAGG 5735 Query 110629 TCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTG 110688 || || | ||| | |||| ||| ||||| | ||| | |||| || | || ||| Sbjct 5736 TCCGGGACCCAGAGAGCCGTGAACAGGTCCCTGCACCTCACCTCCTCGTTGCCAGAGTTC 5795 Query 110689 AGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATG 110748 ||||||||||| || || | || || | |||||| || ||||| |||| ||||| Sbjct 5796 TTGCGTAGCTCCAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATCGCGATC 5855 Query 110749 GATCCCTT 110756 || ||||| Sbjct 5856 GAACCCTT 5863 >seq341 Length=6906 Score = 105 bits (116), Expect = 8e-18 Identities = 272/414 (66%), Gaps = 3/414 (1%) Strand=Plus/Minus Query 110349 ACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGC 110408 ||| | ||| || ||||| ||| |||| || |||||| || ||| |||| || Sbjct 6158 ACAGAGGTTCGAGCTCTTGATGGTCCCCAGGTGCTTCTGGTTGCTCTTGCGGTTGACGGC 6099 Query 110409 ATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCA 110468 ||||| ||||||| ||| || || || ||| ||| | | || ||||| |||| Sbjct 6098 GTCCTTGTAGAGCACGTAGGGCGTGCCGCCCTCCACCTGGGCGGTCAGCATGGCGCTCCA 6039 Query 110469 TACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCT---CCTCGTACTTGGTGTA 110525 ||| | |||| |||| | | || || || | |||||||| | ||| Sbjct 6038 GACAGCCTTGGCGCGGACCACGCGGCTTGCAAGCCCGGGCGTGGCCTCGTACCTCTCGTA 5979 Query 110526 CAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAA 110585 || || ||||| ||| |||||| || || || ||| | ||||||||||| || Sbjct 5978 CAGCTCGTCAAAGGCCTCTCCGTAGCAATAGGACAGGCCCCTGGCCTTGTCGGGGTCAAA 5919 Query 110586 GAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGC 110645 |||| ||| || ||| ||| || | | | ||||| ||||| || | ||||| || Sbjct 5918 AAGGGTCCACACCCCGTCCTGCTCGACGCGCCTGATGAATAGGTCGGGCACCCACAGAGC 5859 Query 110646 CGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAA 110705 || || ||||| ||||| || ||| |||| || ||| ||| ||||||| || Sbjct 5858 CGTAAACAGGTCGCGGCACCGCATCTCCTCATTCCCGCTGTTCTTGCGCAGCTCCAGGAA 5799 Query 110706 GTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 ||| | || |||| ||||| || || | |||| || || |||||||| || Sbjct 5798 GTCAAAGACGTCCGCATGCCAGGGCTCCAAGTAGATGGCAATTGATCCCTTGCG 5745 >seq1718 Length=209761 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/126 (78%), Gaps = 6/126 (5%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG---GA 11648 |||||| ||||| ||||| |||||||||||||| |||||||| |||||||||||| Sbjct 30764 GAAACCATCCATCTCTGTCAGAAGCTGGTTGATGGTCTGTTCCCGCTCATCGTTGCCTCC 30705 Query 11649 GGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGAT 11708 | ||| ||| ||| ||||| | | |||||||||||||| || || || || ||||| Sbjct 30704 GCCCAT---ACCGGCCCCACGCTGCCTGCCGACAGCGTCAATTTCGTCAATAAAGACGAT 30648 Query 11709 ACACGG 11714 || || Sbjct 30647 GCAGGG 30642 >seq1618 Length=149668 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 112545 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 112604 Query 136777 GGGAACAGCTTTTAGATATAT 136797 | || ||| |||| |||||| Sbjct 112605 GTGAGCAG-TTTTTTATATAT 112624 >seq1324 Length=68835 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/234 (70%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 110506 TCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCC 110565 |||| |||||| || |||||| |||||||| | | || |||| || | || ||| Sbjct 21045 TCCTTCTCGTAGCTGATGTACAGCTCCTCAAACTTGTCCCCCCACACCTCCGCCAGGCCC 21104 Query 110566 TTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAAC 110625 | |||| || ||| |||||||||||||| || || |||||| || | |||||||||| Sbjct 21105 TGTGCCTCGTTGGGGCAGAAGAGGGACCACTTGCCGTTCTCCTCCACGCGCTTCATGAAC 21164 Query 110626 AGGTCAGGAATCCACATCGCCG-AGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 ||||| | ||| | |||| |||| ||||| || || |||| || | || || Sbjct 21165 AGGTCGTTCACCCAGA-GGCCGTAGAACAGGTCGCGCGCTCGCACCTCCTCCTTGCCGTG 21223 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA 110738 ||| ||| | || | | || | ||| |||| ||||| ||||| ||||| Sbjct 21224 GTTCTTGCGCAAGTCTAGCCACTCAAAGATGTCCGCATGCCACGGTTCCAGATA 21277 >seq1765 Length=281607 Score = 91.5 bits (100), Expect = 2e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776 ||||||||||||||||||||||||||| |||||||||||||||| ||||||| ||| || Sbjct 40521 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCACAGGTTCGACCCCTGTA 40462 Query 136777 GGGAACAG 136784 | || ||| Sbjct 40461 GTGAGCAG 40454 >seq1085 Length=40323 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| ||| || |||||||| || || |||||||||||| || ||||| ||| Sbjct 2828 GCAAAGTCTGTGTGCAGCCCTTCGTCGCGGCTGATGAGCTCATTGGCAAAACAAAGGCCA 2769 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 |||||||| || | ||||| ||||| ||||||||||| || || | ||| ||| Sbjct 2768 GGCATGAGCCCCCGCTTCTTCAGCCAGAAGATGGCACAGAAGGACCCCAAGAAGTGGATA 2709 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCAC 119675 |||||||| || || || || | || | ||| |||| | || |||| |||| Sbjct 2708 CCCTCCACGCATGCAAAGGCAACGAGCCTCTCTCCAAACGACCGCCCGCACTCGATCCAC 2649 Query 119676 TTGAGAGCCCAGTTGGCCTT 119695 ||| ||||||| ||||| Sbjct 2648 TTGGTTGCCCAGTCCGCCTT 2629 >seq1245 Length=60194 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || ||||| ||||| || |||||||||||| || ||||| || ||||||||||| Sbjct 44556 TGCAGCCCCTCATCGCGGCTGATGAGCTCATTGGCAAAACAAAGGCCGGGCATGAGTCCC 44615 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| |||||||| || || || || ||| ||| |||||||| || Sbjct 44616 CGCTTCTTCAGCCAGAAGATGGCGCAGAATGACCCCGAGAAGTGGATACCCTCCACGCAT 44675 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCAG 119687 || || || | || | ||| |||| | || |||| ||||||| |||||| Sbjct 44676 GCAAAGGCAACGAGCCTCTCTCCAAACGACCGTCCGCGCTCGATCCACTTGGTTGCCCAG 44735 Query 119688 TTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA 119731 | ||||| | || | || |||| | | |||||| |||| Sbjct 44736 TCCGCCTTCCTCTGGACACATGGGATTGAGTCGATGGCGCCGAA 44779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588962644969200