Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq1813 423 3e-113 >seq1813 Length=181482 Score = 423 bits (468), Expect = 3e-113 Identities = 480/644 (75%), Gaps = 0/644 (0%) Strand=Plus/Plus Query 215634 AGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCAC 215693 ||||||| ||| | | | || || ||| | |||||||| ||| |||||||| || | Sbjct 72450 AGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTC 72509 Query 215694 CTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTG 215753 | || | ||||| ||||| ||| | | || || | ||||| || ||||||| Sbjct 72510 CGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTG 72569 Query 215754 ATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGC 215813 ||| |||||| ||||| || || || || ||||||| ||| |||| ||||| ||||||| Sbjct 72570 ATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGC 72629 Query 215814 ACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCAT 215873 |||||||||| |||||||| ||||||||| | ||||||||||| || || || || || Sbjct 72630 ACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTC 72689 Query 215874 TGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGC 215933 |||| ||| ||||| ||||| | ||||| || ||||| | ||||| ||||| Sbjct 72690 TGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAA 72749 Query 215934 AAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAG 215993 | || ||| ||| ||||||||||| || ||||| | ||||| ||||||||||| | Sbjct 72750 ACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGG 72809 Query 215994 CTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAA 216053 |||| |||||||||||||||||||| || ||||||||||| ||||||||||| | Sbjct 72810 CTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTT 72869 Query 216054 GTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTG 216113 | | ||||||||||| || || | ||||| | | |||||| ||||| | ||| Sbjct 72870 CTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTA 72929 Query 216114 TCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCAT 216173 || |||||||||||||||||||||||||||||||||||||| ||||| || ||| Sbjct 72930 TCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCC 72989 Query 216174 CTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAG 216233 || || || |||||||| ||| | | ||| | ||| ||||||||||||| Sbjct 72990 AAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAG 73049 Query 216234 TAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTGGCT 216277 | ||||||||||||||||||||||||||||| | ||| | ||| Sbjct 73050 TGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 196 bits (216), Expect = 7e-45 Identities = 217/287 (76%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || || || |||||||| ||||| || || | ||| | |||||||||||||| || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACT-TGTTTCATCGTAGCATTCATCGCTGCACC 215412 ||||| ||| ||| | | || ||| | ||||| || | || ||||||||||| || Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 44366 Query 215413 TCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAA 215472 |||||| || ||||| || || | ||||| ||| |||||||||| ||||||||||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 215473 CATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTAT 215532 |||||||||||||||| || | |||| || || || || | |||||||||||||| Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 215533 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTT 215579 |||||| || || | |||| |||||||| ||||| || || |||| Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 196 bits (216), Expect = 7e-45 Identities = 217/287 (76%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 || || || |||||||| ||||| || || | ||| | |||||||||||||| || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACC-ACTTGTTTCATCGTAGCATTCATCGCTGCACC 215412 ||||| ||| ||| | | || ||| | ||||| || | || ||||||||||| || Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 134992 Query 215413 TCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAA 215472 |||||| || ||||| || || | ||||| ||| |||||||||| ||||||||||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 215473 CATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTAT 215532 |||||||||||||||| || | |||| || || || || | |||||||||||||| Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 215533 CTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTT 215579 |||||| || || | |||| |||||||| ||||| || || |||| Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745064705274720