Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq1813 578 5e-160 >seq1813 Length=181482 Score = 578 bits (640), Expect = 5e-160 Identities = 739/1010 (73%), Gaps = 6/1010 (1%) Strand=Plus/Plus Query 183193 GATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTGGACTCCTACTTCTT 183252 ||||||||| || || ||| | ||||| ||||| || ||||| || | || || || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTT-TTGTT 117464 Query 183253 CCCAC-TGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTTTTGTTACGAGTTG 183311 ||| |||||| |||| |||||||||||||||| || ||| ||||||| || || Sbjct 117465 CCCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATG 117524 Query 183312 GTATACCCATGGACTTGCTTCTTCCTATCTTGAAGG-TGCTAACTTTCTTACGGCAGCTG 183370 |||||| ||||| | || || || ||||| || ||| |||||| | || || || | Sbjct 117525 GTATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGC-AACTTTTTGACTGCTGCCG 117583 Query 183371 TCTCGACGCCTGCTGAC-GCTATGGGTCATTCTCTTCTGTTACTTTGGGGTCCTGAGTCT 183429 | || || || ||| || ||| ||| |||||||||| | || ||||| || || || Sbjct 117584 TGTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCT 117642 Query 183430 CAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTGTGGCACTCCAC 183489 ||||| || ||| || ||||| ||||| || || || |||| |||||| || | || Sbjct 117643 CAAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCAT 117702 Query 183490 GGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTCGCTTGATTGGT 183549 ||||| |||| | ||||| ||||||||||| || |||||| | ||||||| | Sbjct 117703 GGTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCGCTCTGTCCAA 117762 Query 183550 ATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGTGTATTC 183609 | || ||||| || || ||||| || ||||| |||||| | |||||||| ||| ||| Sbjct 117763 TTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTTC 117822 Query 183610 CTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCA 183669 | || ||||| || ||||| || ||||||||||| || ||||| || || |||||| Sbjct 117823 TTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGCA 117882 Query 183670 ATCTTTAGATTCCTATTGTTCCTTCAGGGTTTCCACAACTGGACGTTAAACCCCTTCCAT 183729 ||||| | ||| | ||||| | || ||||| || |||||||| | ||||| |||||| Sbjct 117883 ATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCAT 117942 Query 183730 ATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTATCCATGGTGTCACA 183789 |||||||| || |||||| | |||||| || || ||| |||| || ||||| | || Sbjct 117943 ATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAACT 118002 Query 183790 GTAGAGAATACATTGTATGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCC 183849 || || || || |||| |||||||||||| || ||||| ||| || ||| | | Sbjct 118003 GTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCCT 118062 Query 183850 ACTCAAGAAGAAGAGACGTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTC 183909 || || ||||| || ||||| |||||||| || || ||||||||||| || ||||| Sbjct 118063 ACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTT 118122 Query 183910 GGGGTTGCGTTTAGCAATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATG 183969 || |||| ||| || || || ||| | || ||||||||| | ||||||||||| | | Sbjct 118123 GGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAACG 118182 Query 183970 GGTCTTTGGGTCTCTTCTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGAT 184029 || |||||| | | ||||| | | || |||||||| |||||| | || |||||| Sbjct 118183 GGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGAT 118242 Query 184030 TTTGTAAGTCAAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACGTTCTACACAAAG 184089 |||||| ||||||||| |||| ||||||||||| |||||||| || || |||||||| Sbjct 118243 TTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAAA 118302 Query 184090 AACATACTTCTTAATGAAGGACTACGTGCATGGTTAGCACCTTCTGATCAACCACATGAG 184149 ||||| ||| | ||||| || | || || ||| | || || ||||| || ||||| Sbjct 118303 AACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGAA 118362 Query 184150 AATTTTATATTTCCAGAGGAGGTATTACCTAGAGGCAATGCTCTTTGATG 184199 ||| || |||| || |||||||| |||| | || || ||||||| ||| Sbjct 118363 AATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCTTTAATG 118412 Score = 533 bits (590), Expect = 2e-146 Identities = 513/658 (78%), Gaps = 0/658 (0%) Strand=Plus/Plus Query 182120 CTACATGGGACGTGAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGT 182179 ||||||||| ||||||||||| ||| | ||| || || |||||||| ||||| ||| Sbjct 72436 CTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTTTGGGCATGCGTCCTTGGATTGCTGT 72495 Query 182180 AGCATACTCTGCTCCAGTCGCTGCAGCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCA 182239 ||| ||||||||||| || || || || | || || ||||| |||| ||| | ||||| Sbjct 72496 AGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAGTGTTCTTGATCTACCCTATTGGTCA 72555 Query 182240 AGGTTCGTTCTCCGATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGT 182299 ||| ||||| |||| ||||| || || || || || || ||||||| |||| | || Sbjct 72556 AGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTTCCGGCACTTTCAACTTTATGATTGT 72615 Query 182300 TTTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGT 182359 ||||||||||||||||||||||||||||| || ||||||||| | ||||| || || || Sbjct 72616 GTTCCAAGCTGAGCACAACATTCTTATGCACCCTTTCCACATGCTTGGTGTGGCTGGCGT 72675 Query 182360 ATTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCG 182419 || || || || ||||||||||| ||||| ||||| |||||||| || | |||| Sbjct 72676 GTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTTCCTTGGTTACTTCCAGCTTAATCCG 72735 Query 182420 TGAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGAC 182479 |||||| ||||| | ||||| ||| |||||||||||| |||||||||| || || Sbjct 72736 TGAGACTACTGAAAACGAGTCTGCTAACGCTGGTTACAAGTTTGGTCAAGAAGGTGAAAC 72795 Query 182480 CTATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATT 182539 || |||||||| || || || || ||||| ||||| | || ||||||||||| || Sbjct 72796 TTACAACATCGTGGCTGCTCACGGTTACTTTGGTCGCCTAATTTTCCAATACGCTAGCTT 72855 Query 182540 CAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTT 182599 ||||||||| ||||| |||||||||||||| ||||| |||||||| || || |||||||| Sbjct 72856 CAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGCATCTGGTT 72915 Query 182600 CACCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTC 182659 || || |||||| || ||| ||||| |||||||| |||||||||||||||||||| || Sbjct 72916 TACTGCTCTTGGTATCAGCACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAATC 72975 Query 182660 CATCCTTGATGGTCAGGGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGG 182719 | |||| | || || ||||| | ||||||||||| || | | |||||||| Sbjct 72976 TGTGGTTGACAGCCAAGGCCGTGTGATCAACACTTGGGCTGACATCATCAACCGTGCAAA 73035 Query 182720 TCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGCT 182777 |||||||||||||| ||||| ||||||||||| ||||||||||| || || || ||| Sbjct 73036 CCTTGGTATGGAAGTGATGCACGAGCGTAACGCTCACAACTTCCCTCTTGACCTAGCT 73093 Score = 232 bits (256), Expect = 8e-56 Identities = 225/287 (78%), Gaps = 2/287 (1%) Strand=Plus/Minus Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853 |||||||| |||||||| || | || || || || |||||||||||||||| || Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATC-TGTTTCATCGTTGCTTTCGTAGCAGCACC 181912 |||||||| || || ||| | |||||| | ||||| || |||| ||| | || || || Sbjct 44424 ATGATCCCTACCCTATTGACTGCAACCTCCGTGTTT-ATTATTGCCTTCATCGCTGCTCC 44366 Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972 |||||| || ||||| ||||| || || || || ||||||| | ||||||||||||| Sbjct 44365 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 44306 Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032 |||||||||||||||| || |||| |||| || |||||||||||||||||||| || Sbjct 44305 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 44246 Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 182079 |||||| ||||| || |||||||| ||||| || ||||| || |||| Sbjct 44245 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 44199 Score = 232 bits (256), Expect = 8e-56 Identities = 225/287 (78%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 181794 TTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTG 181853 |||||||| |||||||| || | || || || || |||||||||||||||| || Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 181854 ATGATCCCAACTCTGTTGGCGGCAACCATCTGT-TTCATCGTTGCTTTCGTAGCAGCACC 181912 |||||||| || || ||| | |||||| || || || || |||| ||| | || || || Sbjct 134934 ATGATCCCTACCCTATTGACTGCAACC-TCCGTGTTTATTATTGCCTTCATCGCTGCTCC 134992 Query 181913 TCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAA 181972 |||||| || ||||| ||||| || || || || ||||||| | ||||||||||||| Sbjct 134993 TCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTAACAA 135052 Query 181973 CATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAAT 182032 |||||||||||||||| || |||| |||| || |||||||||||||||||||| || Sbjct 135053 CATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACCCTAT 135112 Query 182033 CTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTT 182079 |||||| ||||| || |||||||| ||||| || ||||| || |||| Sbjct 135113 CTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTT 135159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611682129793200