Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Klebsormidium_20nitens_20[genbank_20GCA_5F000708835.1_202014-06-03] 1,814 sequences; 104,209,716 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq1813 623 1e-173 >seq1813 Length=181482 Score = 623 bits (690), Expect = 1e-173 Identities = 750/1009 (74%), Gaps = 8/1009 (1%) Strand=Plus/Plus Query 166173 GACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGTTGGTCTGGACTTCTTCTTCTT 166232 || ||||||||| || ||| | || || |||||||||||||| || | ||| || || Sbjct 117406 GATGACTGGCTTCGTCGTGATAGGTTTGTATTTGTTGGTTGGTCAGGTTTACTT-TTGTT 117464 Query 166233 CCCAC-TGCTTATCTTGCTATTGGCGGTTGGCTCACTGGGACTACTTTCGTCACGAGTTG 166291 ||| |||||| ||||| ||||||||||||| || || || ||||| || || || Sbjct 117465 CCCTTGTGCTTACTTTGCTCTTGGCGGTTGGCTTACCGGAACAACTTTTGTAACATCATG 117524 Query 166292 GTATACTCATGGACTCGCAAGCAGTTATCTGGAGGG-TGCAAACTTTCTTACTGCGGCAG 166350 |||||||||||| | |||||| ||| || ||||| ||||| |||| | ||||| || | Sbjct 117525 GTATACTCATGGGTTGGCAAGCTCTTACCTTGAGGGCTGCAA-CTTTTTGACTGCTGCCG 117583 Query 166351 TTTCTACTCCAGCAGAT-GCTATGGGTCATTCTCTACTTCTTCTCTGGGGTCCTGAGGCT 166409 | || || ||||| | ||| ||| ||||||||| | || ||||| || || ||| Sbjct 117584 TGTCAACCCCAGCTAACAGCT-TGGCTCATTCTCTTTTACTATGGTGGGGGCCGGAAGCT 117642 Query 166410 CAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGGGCCTTTGTTGCTCTCCAC 166469 ||||| ||||| | ||||| ||||| || || |||||| | ||||| ||| | || Sbjct 117643 CAAGGAGATTTTACTCGTTGGTGTCAACTAGGTGGTCTTTGGACTTTTGTAGCTTTGCAT 117702 Query 166470 GGTGCTTTTGCCCTAATTGGTTTCATGCTTCGGCAGTTTGAAATCGCTCG-TCTAGTAGG 166528 |||||||||| | | ||||| ||||||||||| || |||||| | ||||| ||| || Sbjct 117703 GGTGCTTTTGGCTTGATTGGATTCATGCTTCGCCAATTTGAATTGGCTCGCTCT-GTCCA 117761 Query 166529 TATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGCTGTCTTCGTTAGTGTCTT 166588 | || || || || || || ||||||||||| |||||| | || || || ||| || Sbjct 117762 ATTACGACCTTATAACGCCATTGCTTTTTCTGGACCTATTTCAGTTTTTGTATCTGTGTT 117821 Query 166589 TCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCCATCTTTCGGGGTCTCAGC 166648 | || || ||||| |||||||| ||||||| || |||||| ||| || || |||| Sbjct 117822 CTTAATTTATCCTCTTGGTCAATCAGGTTGGTTCTTTGCTCCAAGTTTTGGAGTTGCAGC 117881 Query 166649 AATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTGGACACTGAACCCATTTCA 166708 ||||||||| ||| | | || | ||||| || || ||||||||||| ||||| || || Sbjct 117882 AATCTTCCGTTTCATTTTGTTTTTCCAAGGTTTTCATAACTGGACACTTAACCCTTTCCA 117941 Query 166709 TATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTCTGCCATCCATGGTGTTAC 166768 |||||||||||| || ||| || | || | ||| | || | ||| || ||||| | || Sbjct 117942 TATGATGGGTGTGGCTGGTGTTTTAGGAGCTGCTCTTCTCTGTGCAATTCATGGCGCAAC 118001 Query 166769 AGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATACTTTCAAGGCATTCGACTC 166828 || || |||||| ||| | ||||||| || || || |||||| || || || | Sbjct 118002 TGTGGAAAACACTTTGTTTGAAGATGGAGATGGTGCGAACACTTTCCGTGCCTTTAACCC 118061 Query 166829 TACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCGCTATTGGTCTCAGATCTT 166888 ||| || |||||||| ||||| |||||||| |||||||| | |||||||||||||| Sbjct 118062 TACACAGTCCGAAGAAACATATTCCATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTT 118121 Query 166889 CGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTAT 166948 |||||||| ||| || || | ||| | |||||||||||||| ||||||||||| | Sbjct 118122 TGGTATTGCTTTTTCGAACAAACGATGGCTTCATTTCTTTATGCTTTTTGTTCCTGTAAC 118181 Query 166949 GGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGA 167008 ||| || |||| || | || ||| | | |||||||||||||| ||| | || ||||| Sbjct 118182 GGGGCTTTGGATGAGCGCAATTGGTGTAGTAGGTCTTGCTCTCAATCTTAGAGCATATGA 118241 Query 167009 CTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTTTGAAACCTTCTATACCAA 167068 ||||| || ||||| | | || ||||| |||||||| |||||||| || || || || Sbjct 118242 TTTTGTATCTCAAGAGATTCGAGCTGCAGAAGATCCTGAATTTGAAACTTTTTACACAAA 118301 Query 167069 GAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAACTATCGATCAACCTCATGA 167128 |||||||| || ||||||||||| || | |||||||| || ||||| |||||||| Sbjct 118302 AAACATTCTTTTAAATGAGGGTATCCGAGCCTGGATGGCCGCTCAAGATCAGCCTCATGA 118361 Query 167129 GAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGCTCTCTAA 167177 | | | ||||||||||| ||||| || || | || |||||||| ||| Sbjct 118362 AAATCTTGTATTCCCTGAGGAGGTCCTACCACGTGGAAACGCTCTTTAA 118410 Score = 569 bits (630), Expect = 2e-157 Identities = 536/683 (78%), Gaps = 0/683 (0%) Strand=Plus/Plus Query 165065 TCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACTGTCTTACCGCC 165124 |||||||||| | ||||| |||||||||||||| ||||||||||| || | ||| Sbjct 72411 TCCACTTCCTATTGGGTGTGGCTTGCTACATGGGCCGTGAGTGGGAGCTTAGCTTCCGTT 72470 Query 165125 TCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGCTGCTGCCGCAG 165184 | || ||||||||||||||| ||||| || || || || || |||||| |||||| Sbjct 72471 TGGGCATGCGTCCTTGGATTGCTGTAGCTTACTCTGCTCCGGTTGCAGCTGCTACCGCAG 72530 Query 165185 TTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCCTCTTGGTATCT 165244 | ||| || |||| ||| | |||||||| || ||||||||||||||||||||||| || | Sbjct 72531 TGTTCTTGATCTACCCTATTGGTCAAGGCAGCTTCTCTGATGGTATGCCTCTTGGCATTT 72590 Query 165245 CTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCTTATGCATCCGT 165304 | || ||||| |||| |||| | || |||||||| || || |||||||||||||| || | Sbjct 72591 CCGGCACTTTCAACTTTATGATTGTGTTCCAAGCTGAGCACAACATTCTTATGCACCCTT 72650 Query 165305 TCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGCTATGCATGGAA 165364 |||||||||| || || ||||| || || || || ||||| || |||||||||||| Sbjct 72651 TCCACATGCTTGGTGTGGCTGGCGTGTTTGGCGGCTCTCTGTTTAGTGCTATGCATGGTT 72710 Query 165365 GTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCAGAACTACGGTT 165424 | ||||||||| | |||| ||||| ||||||| ||| | ||| |||| Sbjct 72711 CCTTGGTTACTTCCAGCTTAATCCGTGAGACTACTGAAAACGAGTCTGCTAACGCTGGTT 72770 Query 165425 ATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGGGTACTTCGGTC 165484 | |||||||| ||||||| || || || |||||||| ||||| ||||| ||||| |||| Sbjct 72771 ACAAGTTTGGTCAAGAAGGTGAAACTTACAACATCGTGGCTGCTCACGGTTACTTTGGTC 72830 Query 165485 GTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTTCTTCCTCGCAG 165544 | || |||||||||||||| ||||||||| || ||||| ||||||||||||| || | Sbjct 72831 GCCTAATTTTCCAATACGCTAGCTTCAACAACTCTCGTTCTTTGCACTTCTTCCTAGCTG 72890 Query 165545 CATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCAACC 165604 | ||||||||||| || |||||||| |||||||||||| | ||||| ||||| ||||||| Sbjct 72891 CTTGGCCTGTAGTAGGCATCTGGTTTACTGCTCTTGGTATCAGCACTATGGCGTTCAACC 72950 Query 165605 TGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAATCATCCCTACTT 165664 | |||||||||||||||||||| ||| | ||||| || || | | ||| |||| Sbjct 72951 TTAACGGTTTCAACTTCAACCAATCTGTGGTTGACAGCCAAGGCCGTGTGATCAACACTT 73010 Query 165665 GGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCTC 165724 |||||||| | | |||||||| || ||||||||||| ||||| ||||||||||||| Sbjct 73011 GGGCTGACATCATCAACCGTGCAAACCTTGGTATGGAAGTGATGCACGAGCGTAACGCTC 73070 Query 165725 ACAACTTCCCCCTCGACCTCGCT 165747 |||||||||| || ||||| ||| Sbjct 73071 ACAACTTCCCTCTTGACCTAGCT 73093 Score = 219 bits (242), Expect = 5e-52 Identities = 228/296 (77%), Gaps = 10/296 (3%) Strand=Plus/Minus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||||| ||||| || ||| | ||||| ||||| |||||||||| |||||||| Sbjct 44484 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 44425 Query 164824 ATGATCCC----CTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTG 164878 |||||||| || || || || || | || ||||||| ||| |||||||||| Sbjct 44424 ATGATCCCTACCCTATTGACT----GCAACC-TCCGTGTTTATTATTGCCTTCATCGCTG 44370 Query 164879 CTCCCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTA 164938 |||| ||||||||||| |||||||||||||| ||||| | |||||| | |||| |||| Sbjct 44369 CTCCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTA 44310 Query 164939 ACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATC 164998 |||||||||||||||||||| | | || | ||| || || || ||||||||||| | Sbjct 44309 ACAACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACC 44250 Query 164999 CTATTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAG 165054 |||| ||||| ||||| || | ||||||||| | |||||||| || |||||| || Sbjct 44249 CTATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTACGAG 44194 Score = 219 bits (242), Expect = 5e-52 Identities = 228/296 (77%), Gaps = 10/296 (3%) Strand=Plus/Plus Query 164764 TTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTCGGTGTTCTT 164823 || ||||| ||||| || ||| | ||||| ||||| |||||||||| |||||||| Sbjct 134874 TTCTGCGAATGGGTTACCAGCACTGAAAACCGCCTTTACATCGGTTGGTTTGGTGTTCTA 134933 Query 164824 ATGATCCC----CTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCATCGCTG 164878 |||||||| || || || || || | || ||||||| ||| |||||||||| Sbjct 134934 ATGATCCCTACCCTATTGACT----GCAACC-TCCGTGTTTATTATTGCCTTCATCGCTG 134988 Query 164879 CTCCCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTACGGTA 164938 |||| ||||||||||| |||||||||||||| ||||| | |||||| | |||| |||| Sbjct 134989 CTCCTCCTGTGGACATCGATGGTATTCGTGAGCCTGTTTCTGGTTCTTTGCTGTATGGTA 135048 Query 164939 ACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTTCTATC 164998 |||||||||||||||||||| | | || | ||| || || || ||||||||||| | Sbjct 135049 ACAACATCATCTCTGGTGCTATTATCCCTACCTCTGCTGCCATTGGTCTTCACTTCTACC 135108 Query 164999 CTATTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCAG 165054 |||| ||||| ||||| || | ||||||||| | |||||||| || |||||| || Sbjct 135109 CTATCTGGGAGGCTGCTTCCCTTGATGAATGGCTTTACAACGGCGGCCCTTACGAG 135164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563648018991360